Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav16A0A075B653 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav16A0A075B653 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav16A0A075B653 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav16A0A075B653 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav16A0A075B653 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav16A0A075B653 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav16A0A075B653 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
Trav16A0A075B653 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.38□□□□□ -0.11
Trav16A0A075B653 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav16A0A075B653 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav16A0A075B653 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav16A0A075B653 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav16A0A075B653 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav16A0A075B653 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.36□□□□□ -0.11
Trav16A0A075B653 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.36□□□□□ -0.11
Trav16A0A075B653 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav16A0A075B653 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16A0A075B653 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16A0A075B653 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav16A0A075B653 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16A0A075B653 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16A0A075B653 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16A0A075B653 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16A0A075B653 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16A0A075B653 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16A0A075B653 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16A0A075B653 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16A0A075B653 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav16A0A075B653 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16A0A075B653 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trav16A0A075B653 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16A0A075B653 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav16A0A075B653 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16A0A075B653 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16A0A075B653 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav16A0A075B653 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16A0A075B653 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16A0A075B653 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav16A0A075B653 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Trav16A0A075B653 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav16A0A075B653 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.34□□□□□ -0.11
Trav16A0A075B653 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16A0A075B653 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16A0A075B653 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Trav16A0A075B653 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav16A0A075B653 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav16A0A075B653 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav16A0A075B653 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav16A0A075B653 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16A0A075B653 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16A0A075B653 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16A0A075B653 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16A0A075B653 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav16A0A075B653 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.33□□□□□ -0.12
Trav16A0A075B653 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16A0A075B653 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav16A0A075B653 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav16A0A075B653 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16A0A075B653 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16A0A075B653 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16A0A075B653 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms