Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.44□□□□□ -0.1
Trav6n-5A0A075B621 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6n-5A0A075B621 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Serp2-204ENSMUST00000228055 705 ntBASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav6n-5A0A075B621 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav6n-5A0A075B621 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6n-5A0A075B621 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6n-5A0A075B621 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-5A0A075B621 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-5A0A075B621 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-5A0A075B621 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-5A0A075B621 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-5A0A075B621 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-5A0A075B621 Gm13238-201ENSMUST00000117655 780 ntBASIC14.38□□□□□ -0.11
Trav6n-5A0A075B621 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Trav6n-5A0A075B621 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6n-5A0A075B621 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms