Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col1a1P11087 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC8.99□□□□□ -0.97
Col1a1P11087 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col1a1P11087 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Col1a1P11087 Gm43917-201ENSMUST00000191984 2360 ntBASIC8.99□□□□□ -0.97
Col1a1P11087 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col1a1P11087 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Col1a1P11087 Gm37233-201ENSMUST00000192173 6263 ntBASIC8.99□□□□□ -0.97
Col1a1P11087 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.99□□□□□ -0.97
Col1a1P11087 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col1a1P11087 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col1a1P11087 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col1a1P11087 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col1a1P11087 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col1a1P11087 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col1a1P11087 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Col1a1P11087 Gm22671-201ENSMUST00000104420 134 ntBASIC8.99□□□□□ -0.97
Col1a1P11087 Gm15192-201ENSMUST00000121005 293 ntBASIC8.99□□□□□ -0.97
Col1a1P11087 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC8.99□□□□□ -0.97
Col1a1P11087 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC8.99□□□□□ -0.97
Col1a1P11087 Gm5656-201ENSMUST00000171020 1096 ntBASIC8.99□□□□□ -0.97
Col1a1P11087 Gm17786-201ENSMUST00000182000 427 ntBASIC8.99□□□□□ -0.97
Col1a1P11087 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col1a1P11087 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.99□□□□□ -0.97
Col1a1P11087 Gm43033-201ENSMUST00000199682 425 ntBASIC8.99□□□□□ -0.97
Col1a1P11087 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC8.99□□□□□ -0.97
Col1a1P11087 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col1a1P11087 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC8.99□□□□□ -0.97
Col1a1P11087 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC8.99□□□□□ -0.97
Col1a1P11087 Gm17611-202ENSMUST00000220613 814 ntBASIC8.99□□□□□ -0.97
Col1a1P11087 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col1a1P11087 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Col1a1P11087 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Col1a1P11087 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col1a1P11087 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Col1a1P11087 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC8.99□□□□□ -0.97
Col1a1P11087 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC8.99□□□□□ -0.97
Col1a1P11087 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Col1a1P11087 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Col1a1P11087 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.98□□□□□ -0.97
Col1a1P11087 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Col1a1P11087 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col1a1P11087 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Col1a1P11087 Gm13243-201ENSMUST00000117481 565 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 Gm11858-201ENSMUST00000117935 838 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 Gm13221-201ENSMUST00000121712 430 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 Gm15644-201ENSMUST00000121764 387 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Gm8046-201ENSMUST00000172151 616 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 Gm26505-201ENSMUST00000176208 166 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 Mir6357-201ENSMUST00000184246 104 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.98□□□□□ -0.97
Col1a1P11087 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC8.98□□□□□ -0.97
Col1a1P11087 Gm44192-201ENSMUST00000204195 556 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.98□□□□□ -0.97
Col1a1P11087 AC151971.2-201ENSMUST00000217540 909 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col1a1P11087 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Col1a1P11087 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC8.98□□□□□ -0.97
Col1a1P11087 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC8.98□□□□□ -0.97
Col1a1P11087 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Col1a1P11087 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC8.98□□□□□ -0.97
Col1a1P11087 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Col1a1P11087 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC8.98□□□□□ -0.97
Col1a1P11087 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC8.98□□□□□ -0.97
Col1a1P11087 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Hnf4g-201ENSMUST00000108393 2224 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Gm4849-201ENSMUST00000188428 2246 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 Gm38359-201ENSMUST00000191884 2225 ntBASIC8.98□□□□□ -0.97
Col1a1P11087 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col1a1P11087 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Col1a1P11087 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col1a1P11087 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col1a1P11087 Gm28653-201ENSMUST00000185494 5276 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 Gm43839-201ENSMUST00000196183 2325 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms