Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Tpm1P58771 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Tpm1P58771 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Tpm1P58771 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
Tpm1P58771 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC8.57□□□□□ -1.04
Tpm1P58771 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.57□□□□□ -1.04
Tpm1P58771 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Tpm1P58771 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Tpm1P58771 Gm24542-201ENSMUST00000103870 110 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Gm25095-201ENSMUST00000104047 131 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 Gm13005-201ENSMUST00000119518 585 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Gm15763-201ENSMUST00000120136 403 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Gm12870-201ENSMUST00000121383 1016 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Gm14328-201ENSMUST00000122178 408 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 4930401O10Rik-201ENSMUST00000128489 787 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Tpm1P58771 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC8.57□□□□□ -1.04
Tpm1P58771 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC8.57□□□□□ -1.04
Tpm1P58771 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Mir5623-201ENSMUST00000176631 70 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Rnf141-210ENSMUST00000177462 859 ntTSL 5 BASIC8.57□□□□□ -1.04
Tpm1P58771 Gm23403-201ENSMUST00000179169 110 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Gm29143-201ENSMUST00000189462 201 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Gm6375-201ENSMUST00000205201 1145 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 AC155259.1-201ENSMUST00000214794 477 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Tpm1P58771 Gm5292-201ENSMUST00000073317 580 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC8.57□□□□□ -1.04
Tpm1P58771 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Tpm1P58771 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Tpm1P58771 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Gm43982-201ENSMUST00000204995 1829 ntBASIC8.57□□□□□ -1.04
Tpm1P58771 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Tpm1P58771 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Krt39-201ENSMUST00000076948 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.56□□□□□ -1.04
Tpm1P58771 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Tpm1P58771 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 Gm37940-201ENSMUST00000194243 3251 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 Gm43322-201ENSMUST00000196232 1612 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 Gm13542-201ENSMUST00000118484 637 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 Gm11953-201ENSMUST00000122352 1003 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Gm23598-201ENSMUST00000157262 144 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 Gm17157-201ENSMUST00000172397 348 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 Uchl1os-202ENSMUST00000177319 505 ntTSL 3 BASIC8.56□□□□□ -1.04
Tpm1P58771 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Tpm1P58771 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Tpm1P58771 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.56□□□□□ -1.04
Tpm1P58771 Gm7891-201ENSMUST00000190284 843 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 Gm36961-201ENSMUST00000191980 132 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC8.56□□□□□ -1.04
Tpm1P58771 Gm30835-201ENSMUST00000198825 689 ntTSL 3 BASIC8.56□□□□□ -1.04
Tpm1P58771 Gm23786-202ENSMUST00000200181 119 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 AC153937.2-202ENSMUST00000219583 670 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 CT033774.2-201ENSMUST00000222079 256 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Tpm1P58771 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC8.56□□□□□ -1.04
Tpm1P58771 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Tpm1P58771 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Tpm1P58771 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 Gm18313-201ENSMUST00000221036 1784 ntBASIC8.56□□□□□ -1.04
Tpm1P58771 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Tpm1P58771 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC8.55□□□□□ -1.04
Tpm1P58771 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Tpm1P58771 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.55□□□□□ -1.04
Tpm1P58771 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms