Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Hoxa4P06798 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC7.81□□□□□ -1.16
Hoxa4P06798 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm12967-201ENSMUST00000122147 289 ntBASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC7.81□□□□□ -1.16
Hoxa4P06798 Mir1962-201ENSMUST00000157516 121 ntBASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC7.81□□□□□ -1.16
Hoxa4P06798 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC7.81□□□□□ -1.16
Hoxa4P06798 n-R5s115-201ENSMUST00000179019 119 ntBASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm26269-201ENSMUST00000180144 126 ntBASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm8167-201ENSMUST00000183320 958 ntBASIC7.81□□□□□ -1.16
Hoxa4P06798 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm29273-201ENSMUST00000188880 262 ntBASIC7.81□□□□□ -1.16
Hoxa4P06798 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm5541-201ENSMUST00000193248 1113 ntBASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC7.81□□□□□ -1.16
Hoxa4P06798 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm46317-201ENSMUST00000221103 393 ntBASIC7.81□□□□□ -1.16
Hoxa4P06798 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 n-R5s193-201ENSMUST00000082864 109 ntBASIC7.81□□□□□ -1.16
Hoxa4P06798 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Hoxa4P06798 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm45534-201ENSMUST00000211449 2339 ntBASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Hoxa4P06798 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC7.81□□□□□ -1.16
Hoxa4P06798 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Hoxa4P06798 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxa4P06798 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Hoxa4P06798 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Gm12297-201ENSMUST00000121380 979 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 Gm15928-201ENSMUST00000122455 280 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC7.8□□□□□ -1.16
Hoxa4P06798 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC7.8□□□□□ -1.16
Hoxa4P06798 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Mir1968-201ENSMUST00000157429 68 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Gm4898-201ENSMUST00000218519 832 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 AC102689.1-201ENSMUST00000220511 1090 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 AC132587.1-201ENSMUST00000220562 166 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 Gm18243-201ENSMUST00000220756 887 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 AC123920.1-201ENSMUST00000221449 384 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 AC140208.1-201ENSMUST00000226609 285 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 Vmn1r41-204ENSMUST00000227039 985 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Mir24-2-201ENSMUST00000083607 107 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Hoxa4P06798 Gm19031-201ENSMUST00000176280 1365 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Gm42679-201ENSMUST00000197086 2906 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Gm10513-201ENSMUST00000194203 6468 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxa4P06798 Dalir-201ENSMUST00000188773 2170 ntBASIC7.8□□□□□ -1.16
Hoxa4P06798 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms