Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfwd2Q9R1A8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfwd2Q9R1A8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rfwd2Q9R1A8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rfwd2Q9R1A8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfwd2Q9R1A8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfwd2Q9R1A8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfwd2Q9R1A8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfwd2Q9R1A8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rfwd2Q9R1A8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd2Q9R1A8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd2Q9R1A8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd2Q9R1A8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rfwd2Q9R1A8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd2Q9R1A8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd2Q9R1A8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd2Q9R1A8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rfwd2Q9R1A8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd2Q9R1A8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd2Q9R1A8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfwd2Q9R1A8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfwd2Q9R1A8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rfwd2Q9R1A8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.17■□□□□ 0.66
Rfwd2Q9R1A8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfwd2Q9R1A8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.17■□□□□ 0.66
Rfwd2Q9R1A8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.17■□□□□ 0.66
Rfwd2Q9R1A8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfwd2Q9R1A8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfwd2Q9R1A8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfwd2Q9R1A8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Spcs1-204ENSMUST00000226782 949 ntBASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.16■□□□□ 0.66
Rfwd2Q9R1A8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfwd2Q9R1A8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfwd2Q9R1A8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfwd2Q9R1A8 Gm12251-201ENSMUST00000117893 792 ntBASIC19.15■□□□□ 0.66
Rfwd2Q9R1A8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.15■□□□□ 0.66
Rfwd2Q9R1A8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rfwd2Q9R1A8 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.15■□□□□ 0.66
Rfwd2Q9R1A8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfwd2Q9R1A8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfwd2Q9R1A8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfwd2Q9R1A8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rfwd2Q9R1A8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfwd2Q9R1A8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rfwd2Q9R1A8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfwd2Q9R1A8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.14■□□□□ 0.65
Rfwd2Q9R1A8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.14■□□□□ 0.65
Rfwd2Q9R1A8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rfwd2Q9R1A8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Rfwd2Q9R1A8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfwd2Q9R1A8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfwd2Q9R1A8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfwd2Q9R1A8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfwd2Q9R1A8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms