Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf4Q9QZS2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf4Q9QZS2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf4Q9QZS2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf4Q9QZS2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf4Q9QZS2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf4Q9QZS2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf4Q9QZS2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf4Q9QZS2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Rnf4Q9QZS2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Rnf4Q9QZS2 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.83■□□□□ 0.61
Rnf4Q9QZS2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf4Q9QZS2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf4Q9QZS2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.83■□□□□ 0.6
Rnf4Q9QZS2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.83■□□□□ 0.6
Rnf4Q9QZS2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.83■□□□□ 0.6
Rnf4Q9QZS2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf4Q9QZS2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf4Q9QZS2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf4Q9QZS2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rnf4Q9QZS2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf4Q9QZS2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf4Q9QZS2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf4Q9QZS2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf4Q9QZS2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf4Q9QZS2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf4Q9QZS2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf4Q9QZS2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf4Q9QZS2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf4Q9QZS2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf4Q9QZS2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf4Q9QZS2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf4Q9QZS2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf4Q9QZS2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rnf4Q9QZS2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf4Q9QZS2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf4Q9QZS2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf4Q9QZS2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf4Q9QZS2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf4Q9QZS2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf4Q9QZS2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rnf4Q9QZS2 Serp2-204ENSMUST00000228055 705 ntBASIC18.8■□□□□ 0.6
Rnf4Q9QZS2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf4Q9QZS2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf4Q9QZS2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf4Q9QZS2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf4Q9QZS2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Rnf4Q9QZS2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf4Q9QZS2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf4Q9QZS2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms