Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.78■□□□□ 0.6
Shroom3Q9QXN0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Shroom3Q9QXN0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom3Q9QXN0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom3Q9QXN0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom3Q9QXN0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom3Q9QXN0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.78■□□□□ 0.6
Shroom3Q9QXN0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom3Q9QXN0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom3Q9QXN0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom3Q9QXN0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Gm13534-201ENSMUST00000121169 513 ntBASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom3Q9QXN0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shroom3Q9QXN0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shroom3Q9QXN0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shroom3Q9QXN0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.77■□□□□ 0.59
Shroom3Q9QXN0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.77■□□□□ 0.59
Shroom3Q9QXN0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.77■□□□□ 0.59
Shroom3Q9QXN0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom3Q9QXN0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.76■□□□□ 0.59
Shroom3Q9QXN0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Shroom3Q9QXN0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom3Q9QXN0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom3Q9QXN0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Shroom3Q9QXN0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom3Q9QXN0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom3Q9QXN0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom3Q9QXN0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom3Q9QXN0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom3Q9QXN0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Gm6420-201ENSMUST00000193885 723 ntBASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Gm12527-201ENSMUST00000117967 564 ntBASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.75■□□□□ 0.59
Shroom3Q9QXN0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Shroom3Q9QXN0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom3Q9QXN0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom3Q9QXN0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom3Q9QXN0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom3Q9QXN0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom3Q9QXN0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.74■□□□□ 0.59
Shroom3Q9QXN0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom3Q9QXN0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom3Q9QXN0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom3Q9QXN0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom3Q9QXN0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom3Q9QXN0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom3Q9QXN0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom3Q9QXN0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom3Q9QXN0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Shroom3Q9QXN0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom3Q9QXN0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Shroom3Q9QXN0 Gm6211-202ENSMUST00000167849 925 ntBASIC18.72■□□□□ 0.59
Shroom3Q9QXN0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom3Q9QXN0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom3Q9QXN0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom3Q9QXN0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Shroom3Q9QXN0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom3Q9QXN0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom3Q9QXN0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom3Q9QXN0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom3Q9QXN0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms