Protein–RNA interactions for Protein: Q9D8D0

Tnfrsf13c, Tumor necrosis factor receptor superfamily member 13C, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13cQ9D8D0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf13cQ9D8D0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf13cQ9D8D0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf13cQ9D8D0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf13cQ9D8D0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf13cQ9D8D0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tnfrsf13cQ9D8D0 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.57□□□□□ -0.08
Tnfrsf13cQ9D8D0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf13cQ9D8D0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf13cQ9D8D0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.55□□□□□ -0.08
Tnfrsf13cQ9D8D0 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.54□□□□□ -0.08
Tnfrsf13cQ9D8D0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Tnfrsf13cQ9D8D0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.54□□□□□ -0.08
Tnfrsf13cQ9D8D0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf13cQ9D8D0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf13cQ9D8D0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf13cQ9D8D0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf13cQ9D8D0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.54□□□□□ -0.08
Tnfrsf13cQ9D8D0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf13cQ9D8D0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf13cQ9D8D0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf13cQ9D8D0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf13cQ9D8D0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf13cQ9D8D0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf13cQ9D8D0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf13cQ9D8D0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf13cQ9D8D0 Fst-202ENSMUST00000223640 2612 ntBASIC14.52□□□□□ -0.08
Tnfrsf13cQ9D8D0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf13cQ9D8D0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf13cQ9D8D0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Tnfrsf13cQ9D8D0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.52□□□□□ -0.09
Tnfrsf13cQ9D8D0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.52□□□□□ -0.09
Tnfrsf13cQ9D8D0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf13cQ9D8D0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.52□□□□□ -0.09
Tnfrsf13cQ9D8D0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf13cQ9D8D0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf13cQ9D8D0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf13cQ9D8D0 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.51□□□□□ -0.09
Tnfrsf13cQ9D8D0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms