Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nop56Q9D6Z1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nop56Q9D6Z1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nop56Q9D6Z1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nop56Q9D6Z1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nop56Q9D6Z1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nop56Q9D6Z1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nop56Q9D6Z1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.26■□□□□ 0.67
Nop56Q9D6Z1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Nop56Q9D6Z1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Nop56Q9D6Z1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nop56Q9D6Z1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nop56Q9D6Z1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nop56Q9D6Z1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nop56Q9D6Z1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.24■□□□□ 0.67
Nop56Q9D6Z1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nop56Q9D6Z1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nop56Q9D6Z1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nop56Q9D6Z1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nop56Q9D6Z1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nop56Q9D6Z1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nop56Q9D6Z1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nop56Q9D6Z1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nop56Q9D6Z1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nop56Q9D6Z1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Gm15546-201ENSMUST00000122095 826 ntBASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Serp2-204ENSMUST00000228055 705 ntBASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop56Q9D6Z1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop56Q9D6Z1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop56Q9D6Z1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nop56Q9D6Z1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nop56Q9D6Z1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop56Q9D6Z1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop56Q9D6Z1 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.21■□□□□ 0.67
Nop56Q9D6Z1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop56Q9D6Z1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop56Q9D6Z1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop56Q9D6Z1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop56Q9D6Z1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop56Q9D6Z1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms