Protein–RNA interactions for Protein: Q9CWN7

Cnot11, CCR4-NOT transcription complex subunit 11, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot11Q9CWN7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot11Q9CWN7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot11Q9CWN7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot11Q9CWN7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot11Q9CWN7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot11Q9CWN7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot11Q9CWN7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot11Q9CWN7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot11Q9CWN7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cnot11Q9CWN7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cnot11Q9CWN7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cnot11Q9CWN7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cnot11Q9CWN7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnot11Q9CWN7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cnot11Q9CWN7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot11Q9CWN7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot11Q9CWN7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cnot11Q9CWN7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot11Q9CWN7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.11■□□□□ 0.49
Cnot11Q9CWN7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot11Q9CWN7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot11Q9CWN7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot11Q9CWN7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cnot11Q9CWN7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot11Q9CWN7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot11Q9CWN7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot11Q9CWN7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot11Q9CWN7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cnot11Q9CWN7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Cnot11Q9CWN7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.1■□□□□ 0.49
Cnot11Q9CWN7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot11Q9CWN7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot11Q9CWN7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Cnot11Q9CWN7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot11Q9CWN7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cnot11Q9CWN7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cnot11Q9CWN7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnot11Q9CWN7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cnot11Q9CWN7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnot11Q9CWN7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnot11Q9CWN7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnot11Q9CWN7 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.09■□□□□ 0.49
Cnot11Q9CWN7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.09■□□□□ 0.49
Cnot11Q9CWN7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnot11Q9CWN7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cnot11Q9CWN7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cnot11Q9CWN7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms