Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Q9CR55 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Q9CR55 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q9CR55 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Q9CR55 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.27■□□□□ 0.36
Q9CR55 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.27■□□□□ 0.36
Q9CR55 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q9CR55 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q9CR55 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Q9CR55 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.27■□□□□ 0.35
Q9CR55 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q9CR55 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q9CR55 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Q9CR55 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q9CR55 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q9CR55 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Q9CR55 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Q9CR55 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Q9CR55 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Q9CR55 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Q9CR55 Gm15039-201ENSMUST00000118914 875 ntBASIC17.26■□□□□ 0.35
Q9CR55 Gm14117-201ENSMUST00000122417 843 ntBASIC17.26■□□□□ 0.35
Q9CR55 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q9CR55 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.26■□□□□ 0.35
Q9CR55 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q9CR55 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q9CR55 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q9CR55 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q9CR55 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q9CR55 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q9CR55 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q9CR55 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.26■□□□□ 0.35
Q9CR55 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.26■□□□□ 0.35
Q9CR55 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.26■□□□□ 0.35
Q9CR55 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q9CR55 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q9CR55 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Q9CR55 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q9CR55 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Q9CR55 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.24■□□□□ 0.35
Q9CR55 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Q9CR55 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q9CR55 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Q9CR55 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Q9CR55 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.23■□□□□ 0.35
Q9CR55 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.23■□□□□ 0.35
Q9CR55 Gm10232-201ENSMUST00000089221 720 ntBASIC17.23■□□□□ 0.35
Q9CR55 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Q9CR55 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q9CR55 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.22■□□□□ 0.35
Q9CR55 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q9CR55 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.22■□□□□ 0.35
Q9CR55 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q9CR55 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Q9CR55 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Q9CR55 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms