Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
IFT43Q96FT9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.78■■□□□ 1.08
IFT43Q96FT9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IFT43Q96FT9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IFT43Q96FT9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.77■■□□□ 1.08
IFT43Q96FT9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
IFT43Q96FT9 LINC02228-203ENST00000641970 1355 ntBASIC21.77■■□□□ 1.08
IFT43Q96FT9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IFT43Q96FT9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IFT43Q96FT9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
IFT43Q96FT9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
IFT43Q96FT9 AC022517.1-201ENST00000592429 346 ntBASIC21.77■■□□□ 1.08
IFT43Q96FT9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.77■■□□□ 1.08
IFT43Q96FT9 MIR6084-201ENST00000622012 110 ntBASIC21.77■■□□□ 1.08
IFT43Q96FT9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
IFT43Q96FT9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.77■■□□□ 1.08
IFT43Q96FT9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
IFT43Q96FT9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IFT43Q96FT9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.77■■□□□ 1.07
IFT43Q96FT9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.76■■□□□ 1.07
IFT43Q96FT9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IFT43Q96FT9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IFT43Q96FT9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IFT43Q96FT9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
IFT43Q96FT9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
IFT43Q96FT9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IFT43Q96FT9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.76■■□□□ 1.07
IFT43Q96FT9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
IFT43Q96FT9 AL034346.1-201ENST00000568244 1277 ntBASIC21.76■■□□□ 1.07
IFT43Q96FT9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.76■■□□□ 1.07
IFT43Q96FT9 SMUG1P1-201ENST00000590640 811 ntBASIC21.76■■□□□ 1.07
IFT43Q96FT9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
IFT43Q96FT9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.76■■□□□ 1.07
IFT43Q96FT9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
IFT43Q96FT9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
IFT43Q96FT9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
IFT43Q96FT9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IFT43Q96FT9 AP004607.7-201ENST00000527152 1677 ntBASIC21.75■■□□□ 1.07
IFT43Q96FT9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
IFT43Q96FT9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
IFT43Q96FT9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IFT43Q96FT9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.75■■□□□ 1.07
IFT43Q96FT9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
IFT43Q96FT9 CCDC92B-201ENST00000575506 885 ntBASIC21.75■■□□□ 1.07
IFT43Q96FT9 TERF1P2-201ENST00000583350 1212 ntBASIC21.75■■□□□ 1.07
IFT43Q96FT9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IFT43Q96FT9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.75■■□□□ 1.07
IFT43Q96FT9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.75■■□□□ 1.07
IFT43Q96FT9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IFT43Q96FT9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
IFT43Q96FT9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
IFT43Q96FT9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.74■■□□□ 1.07
IFT43Q96FT9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.74■■□□□ 1.07
IFT43Q96FT9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IFT43Q96FT9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.74■■□□□ 1.07
IFT43Q96FT9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.74■■□□□ 1.07
IFT43Q96FT9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IFT43Q96FT9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.74■■□□□ 1.07
IFT43Q96FT9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IFT43Q96FT9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IFT43Q96FT9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.74■■□□□ 1.07
IFT43Q96FT9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
IFT43Q96FT9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IFT43Q96FT9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.73■■□□□ 1.07
IFT43Q96FT9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFT43Q96FT9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFT43Q96FT9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.73■■□□□ 1.07
IFT43Q96FT9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.73■■□□□ 1.07
IFT43Q96FT9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
IFT43Q96FT9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
IFT43Q96FT9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
IFT43Q96FT9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFT43Q96FT9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFT43Q96FT9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
IFT43Q96FT9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.73■■□□□ 1.07
IFT43Q96FT9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.73■■□□□ 1.07
IFT43Q96FT9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.73■■□□□ 1.07
IFT43Q96FT9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.73■■□□□ 1.07
IFT43Q96FT9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFT43Q96FT9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFT43Q96FT9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.73■■□□□ 1.07
IFT43Q96FT9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFT43Q96FT9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFT43Q96FT9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFT43Q96FT9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
IFT43Q96FT9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IFT43Q96FT9 FAM99A-202ENST00000538190 1989 ntBASIC21.72■■□□□ 1.07
IFT43Q96FT9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
IFT43Q96FT9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
IFT43Q96FT9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IFT43Q96FT9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.72■■□□□ 1.07
IFT43Q96FT9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.72■■□□□ 1.07
IFT43Q96FT9 KRT18P14-201ENST00000534205 1250 ntBASIC21.72■■□□□ 1.07
IFT43Q96FT9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.72■■□□□ 1.07
IFT43Q96FT9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IFT43Q96FT9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IFT43Q96FT9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
IFT43Q96FT9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.72■■□□□ 1.07
IFT43Q96FT9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
IFT43Q96FT9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms