Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrna3Q8R4G9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chrna3Q8R4G9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chrna3Q8R4G9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chrna3Q8R4G9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chrna3Q8R4G9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chrna3Q8R4G9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chrna3Q8R4G9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chrna3Q8R4G9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.3■□□□□ 0.52
Chrna3Q8R4G9 Gm6211-202ENSMUST00000167849 925 ntBASIC18.3■□□□□ 0.52
Chrna3Q8R4G9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Chrna3Q8R4G9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chrna3Q8R4G9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chrna3Q8R4G9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chrna3Q8R4G9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chrna3Q8R4G9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 Gm13148-201ENSMUST00000118892 745 ntBASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chrna3Q8R4G9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chrna3Q8R4G9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.27■□□□□ 0.52
Chrna3Q8R4G9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chrna3Q8R4G9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Chrna3Q8R4G9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chrna3Q8R4G9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chrna3Q8R4G9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.27■□□□□ 0.52
Chrna3Q8R4G9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Chrna3Q8R4G9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chrna3Q8R4G9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Chrna3Q8R4G9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chrna3Q8R4G9 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.27■□□□□ 0.52
Chrna3Q8R4G9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chrna3Q8R4G9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chrna3Q8R4G9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Chrna3Q8R4G9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Chrna3Q8R4G9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Chrna3Q8R4G9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chrna3Q8R4G9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chrna3Q8R4G9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chrna3Q8R4G9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Chrna3Q8R4G9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Chrna3Q8R4G9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.26■□□□□ 0.51
Chrna3Q8R4G9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Chrna3Q8R4G9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms