Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 POU5F1P4-201ENST00000413175 1085 ntBASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL27A1Q8IZC6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
COL27A1Q8IZC6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 KRT18P29-201ENST00000397031 1267 ntBASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL27A1Q8IZC6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL27A1Q8IZC6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL27A1Q8IZC6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL27A1Q8IZC6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.19■□□□□ 0.82
COL27A1Q8IZC6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.19■□□□□ 0.82
COL27A1Q8IZC6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL27A1Q8IZC6 AC008403.3-201ENST00000598924 454 ntBASIC20.19■□□□□ 0.82
COL27A1Q8IZC6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.19■□□□□ 0.82
COL27A1Q8IZC6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.19■□□□□ 0.82
COL27A1Q8IZC6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL27A1Q8IZC6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 AC097658.1-201ENST00000475555 843 ntBASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.18■□□□□ 0.82
COL27A1Q8IZC6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 KRT17P1-201ENST00000399211 1546 ntBASIC20.17■□□□□ 0.82
COL27A1Q8IZC6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 AC142381.4-202ENST00000563973 229 ntBASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms