Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h2aaQ8CGP4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hist1h2aaQ8CGP4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h2aaQ8CGP4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Reep4-203ENSMUST00000226563 1444 ntBASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hist1h2aaQ8CGP4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hist1h2aaQ8CGP4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hist1h2aaQ8CGP4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hist1h2aaQ8CGP4 Gm13234-201ENSMUST00000120010 747 ntBASIC17.53■□□□□ 0.4
Hist1h2aaQ8CGP4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hist1h2aaQ8CGP4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hist1h2aaQ8CGP4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.53■□□□□ 0.4
Hist1h2aaQ8CGP4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.53■□□□□ 0.4
Hist1h2aaQ8CGP4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hist1h2aaQ8CGP4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hist1h2aaQ8CGP4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hist1h2aaQ8CGP4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hist1h2aaQ8CGP4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hist1h2aaQ8CGP4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hist1h2aaQ8CGP4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms