Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf31Q8CCF0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf31Q8CCF0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf31Q8CCF0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf31Q8CCF0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf31Q8CCF0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf31Q8CCF0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf31Q8CCF0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf31Q8CCF0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf31Q8CCF0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf31Q8CCF0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Prpf31Q8CCF0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf31Q8CCF0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf31Q8CCF0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf31Q8CCF0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.43■□□□□ 0.86
Prpf31Q8CCF0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.43■□□□□ 0.86
Prpf31Q8CCF0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.43■□□□□ 0.86
Prpf31Q8CCF0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.43■□□□□ 0.86
Prpf31Q8CCF0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf31Q8CCF0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf31Q8CCF0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf31Q8CCF0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Prpf31Q8CCF0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf31Q8CCF0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf31Q8CCF0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.42■□□□□ 0.86
Prpf31Q8CCF0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.42■□□□□ 0.86
Prpf31Q8CCF0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf31Q8CCF0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf31Q8CCF0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf31Q8CCF0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 Gm26524-201ENSMUST00000192339 390 ntBASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf31Q8CCF0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf31Q8CCF0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf31Q8CCF0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf31Q8CCF0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf31Q8CCF0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.4■□□□□ 0.86
Prpf31Q8CCF0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf31Q8CCF0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf31Q8CCF0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf31Q8CCF0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf31Q8CCF0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf31Q8CCF0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Prpf31Q8CCF0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prpf31Q8CCF0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prpf31Q8CCF0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prpf31Q8CCF0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf31Q8CCF0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf31Q8CCF0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf31Q8CCF0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf31Q8CCF0 Gm12527-201ENSMUST00000117967 564 ntBASIC20.39■□□□□ 0.85
Prpf31Q8CCF0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf31Q8CCF0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf31Q8CCF0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.39■□□□□ 0.85
Prpf31Q8CCF0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf31Q8CCF0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Prpf31Q8CCF0 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.39■□□□□ 0.85
Prpf31Q8CCF0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prpf31Q8CCF0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Prpf31Q8CCF0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf31Q8CCF0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf31Q8CCF0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.38■□□□□ 0.85
Prpf31Q8CCF0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf31Q8CCF0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf31Q8CCF0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf31Q8CCF0 Rab3c-203ENSMUST00000224180 967 ntBASIC20.38■□□□□ 0.85
Prpf31Q8CCF0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf31Q8CCF0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Prpf31Q8CCF0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf31Q8CCF0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prpf31Q8CCF0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf31Q8CCF0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf31Q8CCF0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf31Q8CCF0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.37■□□□□ 0.85
Prpf31Q8CCF0 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.37■□□□□ 0.85
Prpf31Q8CCF0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prpf31Q8CCF0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Prpf31Q8CCF0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Prpf31Q8CCF0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Prpf31Q8CCF0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.37■□□□□ 0.85
Prpf31Q8CCF0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf31Q8CCF0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf31Q8CCF0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf31Q8CCF0 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.36■□□□□ 0.85
Prpf31Q8CCF0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf31Q8CCF0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prpf31Q8CCF0 Gm10653-202ENSMUST00000139570 835 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms