Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smim4Q8C1Q6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smim4Q8C1Q6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smim4Q8C1Q6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Gm27801-201ENSMUST00000184174 223 ntBASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smim4Q8C1Q6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Smim4Q8C1Q6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smim4Q8C1Q6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Gm7860-201ENSMUST00000121190 879 ntBASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.61■□□□□ 0.09
Smim4Q8C1Q6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smim4Q8C1Q6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smim4Q8C1Q6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smim4Q8C1Q6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smim4Q8C1Q6 Gm43173-201ENSMUST00000202246 593 ntBASIC15.6■□□□□ 0.09
Smim4Q8C1Q6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smim4Q8C1Q6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smim4Q8C1Q6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smim4Q8C1Q6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smim4Q8C1Q6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smim4Q8C1Q6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smim4Q8C1Q6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smim4Q8C1Q6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smim4Q8C1Q6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms