Protein–RNA interactions for Protein: Q8BXL9

Iffo1, Intermediate filament family orphan 1, mousemouse

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Iffo1Q8BXL9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Iffo1Q8BXL9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Iffo1Q8BXL9 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.25■□□□□ 0.67
Iffo1Q8BXL9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Iffo1Q8BXL9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Iffo1Q8BXL9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Iffo1Q8BXL9 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.25■□□□□ 0.67
Iffo1Q8BXL9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.25■□□□□ 0.67
Iffo1Q8BXL9 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.25■□□□□ 0.67
Iffo1Q8BXL9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Iffo1Q8BXL9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Iffo1Q8BXL9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Iffo1Q8BXL9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Iffo1Q8BXL9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Iffo1Q8BXL9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Iffo1Q8BXL9 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.23■□□□□ 0.67
Iffo1Q8BXL9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Iffo1Q8BXL9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Iffo1Q8BXL9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.23■□□□□ 0.67
Iffo1Q8BXL9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.23■□□□□ 0.67
Iffo1Q8BXL9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.23■□□□□ 0.67
Iffo1Q8BXL9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Iffo1Q8BXL9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Iffo1Q8BXL9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Iffo1Q8BXL9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.23■□□□□ 0.67
Iffo1Q8BXL9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Iffo1Q8BXL9 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.22■□□□□ 0.67
Iffo1Q8BXL9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Iffo1Q8BXL9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Iffo1Q8BXL9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Iffo1Q8BXL9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.22■□□□□ 0.67
Iffo1Q8BXL9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Iffo1Q8BXL9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Iffo1Q8BXL9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Iffo1Q8BXL9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Iffo1Q8BXL9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Iffo1Q8BXL9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.22■□□□□ 0.67
Iffo1Q8BXL9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Iffo1Q8BXL9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Iffo1Q8BXL9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Iffo1Q8BXL9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
Iffo1Q8BXL9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Iffo1Q8BXL9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Iffo1Q8BXL9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Iffo1Q8BXL9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Iffo1Q8BXL9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Iffo1Q8BXL9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Iffo1Q8BXL9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Iffo1Q8BXL9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Iffo1Q8BXL9 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.19■□□□□ 0.66
Iffo1Q8BXL9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Iffo1Q8BXL9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Iffo1Q8BXL9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Iffo1Q8BXL9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms