Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Gm40881-201ENSMUST00000223397 166 ntBASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco3Q8BQM7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 BC021767-201ENSMUST00000126387 1716 ntBASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Grk6-206ENSMUST00000224995 2971 ntBASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smco3Q8BQM7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Smco3Q8BQM7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smco3Q8BQM7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smco3Q8BQM7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms