Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sfr1Q8BP27 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sfr1Q8BP27 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sfr1Q8BP27 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sfr1Q8BP27 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sfr1Q8BP27 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.9■□□□□ 0.62
Sfr1Q8BP27 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sfr1Q8BP27 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sfr1Q8BP27 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sfr1Q8BP27 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sfr1Q8BP27 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sfr1Q8BP27 Gm6420-201ENSMUST00000193885 723 ntBASIC18.9■□□□□ 0.62
Sfr1Q8BP27 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sfr1Q8BP27 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sfr1Q8BP27 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sfr1Q8BP27 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.9■□□□□ 0.62
Sfr1Q8BP27 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sfr1Q8BP27 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sfr1Q8BP27 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sfr1Q8BP27 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Sfr1Q8BP27 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sfr1Q8BP27 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sfr1Q8BP27 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sfr1Q8BP27 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Sfr1Q8BP27 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sfr1Q8BP27 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sfr1Q8BP27 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sfr1Q8BP27 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sfr1Q8BP27 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sfr1Q8BP27 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sfr1Q8BP27 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sfr1Q8BP27 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sfr1Q8BP27 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Gm37179-201ENSMUST00000194862 823 ntBASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sfr1Q8BP27 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sfr1Q8BP27 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sfr1Q8BP27 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sfr1Q8BP27 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.87■□□□□ 0.61
Sfr1Q8BP27 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.87■□□□□ 0.61
Sfr1Q8BP27 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sfr1Q8BP27 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sfr1Q8BP27 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sfr1Q8BP27 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sfr1Q8BP27 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sfr1Q8BP27 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sfr1Q8BP27 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sfr1Q8BP27 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Nespas-201ENSMUST00000143738 1083 ntBASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sfr1Q8BP27 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sfr1Q8BP27 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sfr1Q8BP27 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.85■□□□□ 0.61
Sfr1Q8BP27 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Sfr1Q8BP27 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sfr1Q8BP27 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sfr1Q8BP27 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Sfr1Q8BP27 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.85■□□□□ 0.61
Sfr1Q8BP27 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sfr1Q8BP27 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sfr1Q8BP27 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Sfr1Q8BP27 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sfr1Q8BP27 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sfr1Q8BP27 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sfr1Q8BP27 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.84■□□□□ 0.61
Sfr1Q8BP27 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sfr1Q8BP27 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sfr1Q8BP27 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sfr1Q8BP27 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.84■□□□□ 0.61
Sfr1Q8BP27 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms