Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf18Q8BM39 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.74■□□□□ 0.43
Prpf18Q8BM39 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf18Q8BM39 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Gm9847-201ENSMUST00000052528 599 ntBASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.72■□□□□ 0.43
Prpf18Q8BM39 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf18Q8BM39 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf18Q8BM39 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
Prpf18Q8BM39 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.71■□□□□ 0.43
Prpf18Q8BM39 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Prpf18Q8BM39 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Prpf18Q8BM39 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.71■□□□□ 0.43
Prpf18Q8BM39 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Prpf18Q8BM39 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf18Q8BM39 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Prpf18Q8BM39 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf18Q8BM39 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.71■□□□□ 0.43
Prpf18Q8BM39 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.71■□□□□ 0.42
Prpf18Q8BM39 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Prpf18Q8BM39 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf18Q8BM39 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf18Q8BM39 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf18Q8BM39 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf18Q8BM39 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.7■□□□□ 0.42
Prpf18Q8BM39 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.7■□□□□ 0.42
Prpf18Q8BM39 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf18Q8BM39 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf18Q8BM39 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf18Q8BM39 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf18Q8BM39 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf18Q8BM39 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Prpf18Q8BM39 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf18Q8BM39 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Prpf18Q8BM39 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.68■□□□□ 0.42
Prpf18Q8BM39 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms