Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc5a7Q8BGY9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc5a7Q8BGY9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc5a7Q8BGY9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc5a7Q8BGY9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc5a7Q8BGY9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc5a7Q8BGY9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc5a7Q8BGY9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.37■□□□□ 0.21
Slc5a7Q8BGY9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc5a7Q8BGY9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc5a7Q8BGY9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc5a7Q8BGY9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc5a7Q8BGY9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Slc5a7Q8BGY9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Slc5a7Q8BGY9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Slc5a7Q8BGY9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Slc5a7Q8BGY9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc5a7Q8BGY9 Serp2-204ENSMUST00000228055 705 ntBASIC16.36■□□□□ 0.21
Slc5a7Q8BGY9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc5a7Q8BGY9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc5a7Q8BGY9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc5a7Q8BGY9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc5a7Q8BGY9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc5a7Q8BGY9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Slc5a7Q8BGY9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc5a7Q8BGY9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc5a7Q8BGY9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc5a7Q8BGY9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.34■□□□□ 0.21
Slc5a7Q8BGY9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc5a7Q8BGY9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.34■□□□□ 0.21
Slc5a7Q8BGY9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Slc5a7Q8BGY9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.34■□□□□ 0.21
Slc5a7Q8BGY9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc5a7Q8BGY9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc5a7Q8BGY9 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.34■□□□□ 0.21
Slc5a7Q8BGY9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc5a7Q8BGY9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Slc5a7Q8BGY9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc5a7Q8BGY9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc5a7Q8BGY9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.33■□□□□ 0.2
Slc5a7Q8BGY9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.33■□□□□ 0.2
Slc5a7Q8BGY9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.33■□□□□ 0.2
Slc5a7Q8BGY9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.33■□□□□ 0.2
Slc5a7Q8BGY9 Gm5921-201ENSMUST00000075898 882 ntBASIC16.33■□□□□ 0.2
Slc5a7Q8BGY9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Slc5a7Q8BGY9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc5a7Q8BGY9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc5a7Q8BGY9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Slc5a7Q8BGY9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc5a7Q8BGY9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Slc5a7Q8BGY9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc5a7Q8BGY9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms