Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim23Q8BGX0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim23Q8BGX0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim23Q8BGX0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim23Q8BGX0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim23Q8BGX0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.01■□□□□ 0.47
Trim23Q8BGX0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim23Q8BGX0 Gm6211-202ENSMUST00000167849 925 ntBASIC18.01■□□□□ 0.47
Trim23Q8BGX0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim23Q8BGX0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trim23Q8BGX0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim23Q8BGX0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim23Q8BGX0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim23Q8BGX0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18■□□□□ 0.47
Trim23Q8BGX0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim23Q8BGX0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim23Q8BGX0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim23Q8BGX0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim23Q8BGX0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim23Q8BGX0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18■□□□□ 0.47
Trim23Q8BGX0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim23Q8BGX0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim23Q8BGX0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim23Q8BGX0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim23Q8BGX0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18■□□□□ 0.47
Trim23Q8BGX0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim23Q8BGX0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Trim23Q8BGX0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trim23Q8BGX0 Gm10167-201ENSMUST00000150411 1479 ntBASIC18■□□□□ 0.47
Trim23Q8BGX0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim23Q8BGX0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim23Q8BGX0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim23Q8BGX0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim23Q8BGX0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim23Q8BGX0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim23Q8BGX0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim23Q8BGX0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Trim23Q8BGX0 Gm29257-201ENSMUST00000186115 639 ntBASIC17.99■□□□□ 0.47
Trim23Q8BGX0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim23Q8BGX0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim23Q8BGX0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim23Q8BGX0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim23Q8BGX0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim23Q8BGX0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trim23Q8BGX0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim23Q8BGX0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim23Q8BGX0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim23Q8BGX0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim23Q8BGX0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim23Q8BGX0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim23Q8BGX0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim23Q8BGX0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim23Q8BGX0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim23Q8BGX0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim23Q8BGX0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim23Q8BGX0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim23Q8BGX0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim23Q8BGX0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim23Q8BGX0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim23Q8BGX0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim23Q8BGX0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim23Q8BGX0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim23Q8BGX0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim23Q8BGX0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim23Q8BGX0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim23Q8BGX0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim23Q8BGX0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim23Q8BGX0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim23Q8BGX0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim23Q8BGX0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim23Q8BGX0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim23Q8BGX0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim23Q8BGX0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim23Q8BGX0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim23Q8BGX0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim23Q8BGX0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim23Q8BGX0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trim23Q8BGX0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim23Q8BGX0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trim23Q8BGX0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim23Q8BGX0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim23Q8BGX0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim23Q8BGX0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim23Q8BGX0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim23Q8BGX0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms