Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrtm4Q80XG9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Lrrtm4Q80XG9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrtm4Q80XG9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrtm4Q80XG9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrtm4Q80XG9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Lrrtm4Q80XG9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.18■□□□□ 0.5
Lrrtm4Q80XG9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lrrtm4Q80XG9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrtm4Q80XG9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrtm4Q80XG9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Gm5408-201ENSMUST00000197998 747 ntBASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrtm4Q80XG9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lrrtm4Q80XG9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrtm4Q80XG9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrtm4Q80XG9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Lrrtm4Q80XG9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Lrrtm4Q80XG9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.16■□□□□ 0.5
Lrrtm4Q80XG9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrtm4Q80XG9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrtm4Q80XG9 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.16■□□□□ 0.5
Lrrtm4Q80XG9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrtm4Q80XG9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Lrrtm4Q80XG9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrtm4Q80XG9 Iqck-206ENSMUST00000208658 2891 ntBASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrtm4Q80XG9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrrtm4Q80XG9 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.14■□□□□ 0.49
Lrrtm4Q80XG9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrrtm4Q80XG9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lrrtm4Q80XG9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.14■□□□□ 0.49
Lrrtm4Q80XG9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.14■□□□□ 0.49
Lrrtm4Q80XG9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Lrrtm4Q80XG9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrrtm4Q80XG9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrrtm4Q80XG9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrrtm4Q80XG9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lrrtm4Q80XG9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrtm4Q80XG9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrtm4Q80XG9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrtm4Q80XG9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrtm4Q80XG9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Lrrtm4Q80XG9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrtm4Q80XG9 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.13■□□□□ 0.49
Lrrtm4Q80XG9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrtm4Q80XG9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrtm4Q80XG9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrtm4Q80XG9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrtm4Q80XG9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lrrtm4Q80XG9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lrrtm4Q80XG9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lrrtm4Q80XG9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms