Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.64■□□□□ 0.41
Trim45Q6PFY8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trim45Q6PFY8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim45Q6PFY8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim45Q6PFY8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim45Q6PFY8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim45Q6PFY8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim45Q6PFY8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trim45Q6PFY8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim45Q6PFY8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trim45Q6PFY8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim45Q6PFY8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim45Q6PFY8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim45Q6PFY8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim45Q6PFY8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim45Q6PFY8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim45Q6PFY8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim45Q6PFY8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim45Q6PFY8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Gm13146-201ENSMUST00000118508 780 ntBASIC17.59■□□□□ 0.41
Trim45Q6PFY8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim45Q6PFY8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim45Q6PFY8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim45Q6PFY8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim45Q6PFY8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim45Q6PFY8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim45Q6PFY8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim45Q6PFY8 Gm29257-201ENSMUST00000186115 639 ntBASIC17.58■□□□□ 0.4
Trim45Q6PFY8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim45Q6PFY8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms