Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctnna3Q65CL1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.92■□□□□ 0.94
Ctnna3Q65CL1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ctnna3Q65CL1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctnna3Q65CL1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ctnna3Q65CL1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ctnna3Q65CL1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctnna3Q65CL1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ctnna3Q65CL1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctnna3Q65CL1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctnna3Q65CL1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctnna3Q65CL1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Gm8520-201ENSMUST00000186517 868 ntBASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Gm4968-201ENSMUST00000071458 858 ntBASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.91■□□□□ 0.94
Ctnna3Q65CL1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctnna3Q65CL1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctnna3Q65CL1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctnna3Q65CL1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.9■□□□□ 0.94
Ctnna3Q65CL1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctnna3Q65CL1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctnna3Q65CL1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctnna3Q65CL1 Rarb-207ENSMUST00000225921 2756 ntBASIC20.9■□□□□ 0.94
Ctnna3Q65CL1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctnna3Q65CL1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctnna3Q65CL1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ctnna3Q65CL1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ctnna3Q65CL1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctnna3Q65CL1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctnna3Q65CL1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Ctnna3Q65CL1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.89■□□□□ 0.93
Ctnna3Q65CL1 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.89■□□□□ 0.93
Ctnna3Q65CL1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctnna3Q65CL1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctnna3Q65CL1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Ctnna3Q65CL1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctnna3Q65CL1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctnna3Q65CL1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctnna3Q65CL1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Ctnna3Q65CL1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Gm7860-201ENSMUST00000121190 879 ntBASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Ctnna3Q65CL1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctnna3Q65CL1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctnna3Q65CL1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctnna3Q65CL1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctnna3Q65CL1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ctnna3Q65CL1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ctnna3Q65CL1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ctnna3Q65CL1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ctnna3Q65CL1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ctnna3Q65CL1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctnna3Q65CL1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctnna3Q65CL1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ctnna3Q65CL1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.85■□□□□ 0.93
Ctnna3Q65CL1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ctnna3Q65CL1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ctnna3Q65CL1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms