Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox17Q61473 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sox17Q61473 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox17Q61473 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sox17Q61473 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox17Q61473 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox17Q61473 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.5■□□□□ 0.39
Sox17Q61473 Fst-202ENSMUST00000223640 2612 ntBASIC17.5■□□□□ 0.39
Sox17Q61473 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox17Q61473 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox17Q61473 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.49■□□□□ 0.39
Sox17Q61473 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sox17Q61473 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sox17Q61473 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox17Q61473 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox17Q61473 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.49■□□□□ 0.39
Sox17Q61473 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sox17Q61473 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox17Q61473 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.49■□□□□ 0.39
Sox17Q61473 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sox17Q61473 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox17Q61473 Gm22238-201ENSMUST00000175222 88 ntBASIC17.49■□□□□ 0.39
Sox17Q61473 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox17Q61473 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sox17Q61473 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox17Q61473 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox17Q61473 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox17Q61473 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox17Q61473 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.48■□□□□ 0.39
Sox17Q61473 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sox17Q61473 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.48■□□□□ 0.39
Sox17Q61473 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.48■□□□□ 0.39
Sox17Q61473 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox17Q61473 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox17Q61473 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox17Q61473 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox17Q61473 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox17Q61473 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox17Q61473 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox17Q61473 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox17Q61473 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sox17Q61473 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox17Q61473 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
Sox17Q61473 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.47■□□□□ 0.39
Sox17Q61473 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox17Q61473 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
Sox17Q61473 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.47■□□□□ 0.39
Sox17Q61473 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sox17Q61473 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Sox17Q61473 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox17Q61473 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sox17Q61473 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox17Q61473 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.47■□□□□ 0.39
Sox17Q61473 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sox17Q61473 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Sox17Q61473 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.46■□□□□ 0.39
Sox17Q61473 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sox17Q61473 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.46■□□□□ 0.39
Sox17Q61473 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sox17Q61473 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox17Q61473 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Sox17Q61473 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox17Q61473 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox17Q61473 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox17Q61473 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox17Q61473 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox17Q61473 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sox17Q61473 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox17Q61473 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox17Q61473 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.45■□□□□ 0.38
Sox17Q61473 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox17Q61473 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox17Q61473 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
Sox17Q61473 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox17Q61473 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox17Q61473 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox17Q61473 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.44■□□□□ 0.38
Sox17Q61473 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sox17Q61473 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.44■□□□□ 0.38
Sox17Q61473 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox17Q61473 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms