Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Traf4Q61382 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Traf4Q61382 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.48■□□□□ 0.23
Traf4Q61382 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Traf4Q61382 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Traf4Q61382 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Traf4Q61382 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Traf4Q61382 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Traf4Q61382 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.48■□□□□ 0.23
Traf4Q61382 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.48■□□□□ 0.23
Traf4Q61382 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Traf4Q61382 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Traf4Q61382 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Traf4Q61382 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Traf4Q61382 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Traf4Q61382 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Traf4Q61382 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Traf4Q61382 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Traf4Q61382 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Traf4Q61382 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Traf4Q61382 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Traf4Q61382 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.47■□□□□ 0.23
Traf4Q61382 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Traf4Q61382 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Traf4Q61382 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.47■□□□□ 0.23
Traf4Q61382 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.47■□□□□ 0.23
Traf4Q61382 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Traf4Q61382 Gm10602-201ENSMUST00000098239 609 ntBASIC16.47■□□□□ 0.23
Traf4Q61382 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Traf4Q61382 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Traf4Q61382 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.47■□□□□ 0.23
Traf4Q61382 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Traf4Q61382 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Traf4Q61382 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Traf4Q61382 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.47■□□□□ 0.23
Traf4Q61382 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Traf4Q61382 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.47■□□□□ 0.23
Traf4Q61382 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Traf4Q61382 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 Gm12933-201ENSMUST00000120203 872 ntBASIC16.46■□□□□ 0.23
Traf4Q61382 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.46■□□□□ 0.23
Traf4Q61382 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.46■□□□□ 0.23
Traf4Q61382 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Traf4Q61382 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Traf4Q61382 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Traf4Q61382 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Traf4Q61382 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Traf4Q61382 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Traf4Q61382 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Traf4Q61382 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.45■□□□□ 0.22
Traf4Q61382 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Traf4Q61382 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Traf4Q61382 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Traf4Q61382 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Traf4Q61382 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Traf4Q61382 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Traf4Q61382 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Traf4Q61382 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Traf4Q61382 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Traf4Q61382 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Traf4Q61382 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Traf4Q61382 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.44■□□□□ 0.22
Traf4Q61382 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Traf4Q61382 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Traf4Q61382 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Traf4Q61382 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.44■□□□□ 0.22
Traf4Q61382 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.43■□□□□ 0.22
Traf4Q61382 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Traf4Q61382 Gm7514-201ENSMUST00000209475 934 ntBASIC16.43■□□□□ 0.22
Traf4Q61382 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.43■□□□□ 0.22
Traf4Q61382 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Traf4Q61382 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Traf4Q61382 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.43■□□□□ 0.22
Traf4Q61382 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.43■□□□□ 0.22
Traf4Q61382 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Traf4Q61382 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Traf4Q61382 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Traf4Q61382 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Traf4Q61382 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Traf4Q61382 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.42■□□□□ 0.22
Traf4Q61382 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Traf4Q61382 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Traf4Q61382 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.42■□□□□ 0.22
Traf4Q61382 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Traf4Q61382 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Traf4Q61382 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.42■□□□□ 0.22
Traf4Q61382 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms