Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scarb1Q61009 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scarb1Q61009 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scarb1Q61009 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scarb1Q61009 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scarb1Q61009 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Scarb1Q61009 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scarb1Q61009 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scarb1Q61009 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.73■□□□□ 0.11
Scarb1Q61009 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scarb1Q61009 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scarb1Q61009 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.73■□□□□ 0.11
Scarb1Q61009 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.73■□□□□ 0.11
Scarb1Q61009 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scarb1Q61009 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Scarb1Q61009 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scarb1Q61009 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scarb1Q61009 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scarb1Q61009 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.72■□□□□ 0.11
Scarb1Q61009 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scarb1Q61009 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Scarb1Q61009 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.72■□□□□ 0.11
Scarb1Q61009 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Scarb1Q61009 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scarb1Q61009 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scarb1Q61009 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scarb1Q61009 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scarb1Q61009 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Scarb1Q61009 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scarb1Q61009 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scarb1Q61009 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scarb1Q61009 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scarb1Q61009 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scarb1Q61009 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scarb1Q61009 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scarb1Q61009 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.71■□□□□ 0.11
Scarb1Q61009 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.71■□□□□ 0.11
Scarb1Q61009 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Scarb1Q61009 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Scarb1Q61009 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.71■□□□□ 0.11
Scarb1Q61009 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scarb1Q61009 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scarb1Q61009 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scarb1Q61009 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scarb1Q61009 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scarb1Q61009 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scarb1Q61009 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scarb1Q61009 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scarb1Q61009 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Scarb1Q61009 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.71■□□□□ 0.1
Scarb1Q61009 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scarb1Q61009 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.71■□□□□ 0.1
Scarb1Q61009 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scarb1Q61009 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scarb1Q61009 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scarb1Q61009 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scarb1Q61009 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scarb1Q61009 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.7■□□□□ 0.1
Scarb1Q61009 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scarb1Q61009 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.7■□□□□ 0.1
Scarb1Q61009 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Scarb1Q61009 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Scarb1Q61009 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scarb1Q61009 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scarb1Q61009 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.7■□□□□ 0.1
Scarb1Q61009 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.7■□□□□ 0.1
Scarb1Q61009 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scarb1Q61009 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scarb1Q61009 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Scarb1Q61009 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scarb1Q61009 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scarb1Q61009 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.69■□□□□ 0.1
Scarb1Q61009 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scarb1Q61009 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scarb1Q61009 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scarb1Q61009 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scarb1Q61009 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scarb1Q61009 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.69■□□□□ 0.1
Scarb1Q61009 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.69■□□□□ 0.1
Scarb1Q61009 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scarb1Q61009 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scarb1Q61009 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scarb1Q61009 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Scarb1Q61009 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scarb1Q61009 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scarb1Q61009 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scarb1Q61009 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scarb1Q61009 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scarb1Q61009 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Scarb1Q61009 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scarb1Q61009 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scarb1Q61009 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scarb1Q61009 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scarb1Q61009 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scarb1Q61009 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.68■□□□□ 0.1
Scarb1Q61009 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.68■□□□□ 0.1
Scarb1Q61009 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scarb1Q61009 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scarb1Q61009 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Scarb1Q61009 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms