Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.03■■□□□ 1.28
Ubr3Q5U430 Gm12382-201ENSMUST00000122005 922 ntBASIC23.02■■□□□ 1.28
Ubr3Q5U430 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ubr3Q5U430 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ubr3Q5U430 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ubr3Q5U430 Gm42545-201ENSMUST00000202755 922 ntBASIC23.02■■□□□ 1.28
Ubr3Q5U430 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Ubr3Q5U430 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ubr3Q5U430 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC23.01■■□□□ 1.27
Ubr3Q5U430 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ubr3Q5U430 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC23.01■■□□□ 1.27
Ubr3Q5U430 Gm8309-201ENSMUST00000206627 1448 ntBASIC23.01■■□□□ 1.27
Ubr3Q5U430 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr3Q5U430 Gm6728-201ENSMUST00000178117 1065 ntBASIC23■■□□□ 1.27
Ubr3Q5U430 Gm27741-201ENSMUST00000185060 237 ntBASIC23■■□□□ 1.27
Ubr3Q5U430 AC156016.1-201ENSMUST00000227190 1035 ntBASIC23■■□□□ 1.27
Ubr3Q5U430 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr3Q5U430 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr3Q5U430 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr3Q5U430 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr3Q5U430 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr3Q5U430 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ubr3Q5U430 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ubr3Q5U430 AC107452.1-201ENSMUST00000227963 481 ntBASIC23■■□□□ 1.27
Ubr3Q5U430 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ubr3Q5U430 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23■■□□□ 1.27
Ubr3Q5U430 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ubr3Q5U430 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ubr3Q5U430 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC22.99■■□□□ 1.27
Ubr3Q5U430 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ubr3Q5U430 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC22.99■■□□□ 1.27
Ubr3Q5U430 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
Ubr3Q5U430 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ubr3Q5U430 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ubr3Q5U430 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr3Q5U430 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr3Q5U430 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr3Q5U430 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr3Q5U430 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr3Q5U430 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr3Q5U430 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC22.98■■□□□ 1.27
Ubr3Q5U430 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC22.98■■□□□ 1.27
Ubr3Q5U430 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ubr3Q5U430 Gm10138-203ENSMUST00000206952 366 ntBASIC22.98■■□□□ 1.27
Ubr3Q5U430 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Ubr3Q5U430 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
Ubr3Q5U430 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
Ubr3Q5U430 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ubr3Q5U430 Gm10517-202ENSMUST00000192970 758 ntBASIC22.97■■□□□ 1.27
Ubr3Q5U430 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Ubr3Q5U430 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ubr3Q5U430 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ubr3Q5U430 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr3Q5U430 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr3Q5U430 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr3Q5U430 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.96■■□□□ 1.27
Ubr3Q5U430 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr3Q5U430 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr3Q5U430 Gm7712-202ENSMUST00000222331 1510 ntBASIC22.96■■□□□ 1.27
Ubr3Q5U430 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC22.96■■□□□ 1.27
Ubr3Q5U430 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr3Q5U430 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr3Q5U430 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC22.96■■□□□ 1.27
Ubr3Q5U430 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr3Q5U430 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr3Q5U430 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC22.96■■□□□ 1.27
Ubr3Q5U430 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ubr3Q5U430 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Ubr3Q5U430 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ubr3Q5U430 AC124581.1-201ENSMUST00000225416 1399 ntBASIC22.95■■□□□ 1.26
Ubr3Q5U430 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ubr3Q5U430 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC22.95■■□□□ 1.26
Ubr3Q5U430 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC22.95■■□□□ 1.26
Ubr3Q5U430 Gm18032-201ENSMUST00000222541 538 ntBASIC22.95■■□□□ 1.26
Ubr3Q5U430 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ubr3Q5U430 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ubr3Q5U430 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ubr3Q5U430 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ubr3Q5U430 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ubr3Q5U430 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ubr3Q5U430 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC22.94■■□□□ 1.26
Ubr3Q5U430 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ubr3Q5U430 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ubr3Q5U430 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ubr3Q5U430 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ubr3Q5U430 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ubr3Q5U430 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Ubr3Q5U430 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ubr3Q5U430 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ubr3Q5U430 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC22.93■■□□□ 1.26
Ubr3Q5U430 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
Ubr3Q5U430 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ubr3Q5U430 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ubr3Q5U430 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ubr3Q5U430 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Ubr3Q5U430 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.92■■□□□ 1.26
Ubr3Q5U430 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Ubr3Q5U430 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Ubr3Q5U430 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ubr3Q5U430 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms