Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-4Q5R1I0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Gm12441-201ENSMUST00000121806 588 ntBASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Gm4968-201ENSMUST00000071458 858 ntBASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-4Q5R1I0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-4Q5R1I0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav6d-4Q5R1I0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.66■□□□□ 0.1
Trav6d-4Q5R1I0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-4Q5R1I0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trav6d-4Q5R1I0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-4Q5R1I0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-4Q5R1I0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-4Q5R1I0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-4Q5R1I0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-4Q5R1I0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-4Q5R1I0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav6d-4Q5R1I0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-4Q5R1I0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav6d-4Q5R1I0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.64■□□□□ 0.09
Trav6d-4Q5R1I0 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.64■□□□□ 0.09
Trav6d-4Q5R1I0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav6d-4Q5R1I0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav6d-4Q5R1I0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Trav6d-4Q5R1I0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Trav6d-4Q5R1I0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav6d-4Q5R1I0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-4Q5R1I0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 686.2 ms