Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-1Q5R1H8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8d-1Q5R1H8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8d-1Q5R1H8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8d-1Q5R1H8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav8d-1Q5R1H8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8d-1Q5R1H8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8d-1Q5R1H8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8d-1Q5R1H8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8d-1Q5R1H8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8d-1Q5R1H8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8d-1Q5R1H8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8d-1Q5R1H8 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.27■□□□□ 0.03
Trav8d-1Q5R1H8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8d-1Q5R1H8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8d-1Q5R1H8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8d-1Q5R1H8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Mir6236-201ENSMUST00000184437 123 ntBASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-1Q5R1H8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-1Q5R1H8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav8d-1Q5R1H8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav8d-1Q5R1H8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-1Q5R1H8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-1Q5R1H8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav8d-1Q5R1H8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-1Q5R1H8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-1Q5R1H8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-1Q5R1H8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-1Q5R1H8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trav8d-1Q5R1H8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 Gm21956-201ENSMUST00000179946 522 ntBASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8d-1Q5R1H8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8d-1Q5R1H8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms