Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rc3h1Q4VGL6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rc3h1Q4VGL6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rc3h1Q4VGL6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.65■■□□□ 1.06
Rc3h1Q4VGL6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rc3h1Q4VGL6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rc3h1Q4VGL6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Rc3h1Q4VGL6 Gm20760-201ENSMUST00000179197 648 ntBASIC21.65■■□□□ 1.06
Rc3h1Q4VGL6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.65■■□□□ 1.06
Rc3h1Q4VGL6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Rc3h1Q4VGL6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.65■■□□□ 1.06
Rc3h1Q4VGL6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rc3h1Q4VGL6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rc3h1Q4VGL6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rc3h1Q4VGL6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rc3h1Q4VGL6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rc3h1Q4VGL6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rc3h1Q4VGL6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rc3h1Q4VGL6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rc3h1Q4VGL6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rc3h1Q4VGL6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rc3h1Q4VGL6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rc3h1Q4VGL6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rc3h1Q4VGL6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rc3h1Q4VGL6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Rc3h1Q4VGL6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rc3h1Q4VGL6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rc3h1Q4VGL6 Gm27275-201ENSMUST00000184318 272 ntBASIC21.63■■□□□ 1.05
Rc3h1Q4VGL6 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.63■■□□□ 1.05
Rc3h1Q4VGL6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Rc3h1Q4VGL6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rc3h1Q4VGL6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rc3h1Q4VGL6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rc3h1Q4VGL6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rc3h1Q4VGL6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.62■■□□□ 1.05
Rc3h1Q4VGL6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.62■■□□□ 1.05
Rc3h1Q4VGL6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.62■■□□□ 1.05
Rc3h1Q4VGL6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rc3h1Q4VGL6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rc3h1Q4VGL6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rc3h1Q4VGL6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rc3h1Q4VGL6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rc3h1Q4VGL6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rc3h1Q4VGL6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Gm12896-201ENSMUST00000118430 226 ntBASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rc3h1Q4VGL6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rc3h1Q4VGL6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rc3h1Q4VGL6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rc3h1Q4VGL6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rc3h1Q4VGL6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rc3h1Q4VGL6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rc3h1Q4VGL6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rc3h1Q4VGL6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rc3h1Q4VGL6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rc3h1Q4VGL6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rc3h1Q4VGL6 Trmt13-210ENSMUST00000198454 880 ntBASIC21.59■■□□□ 1.05
Rc3h1Q4VGL6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rc3h1Q4VGL6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.59■■□□□ 1.05
Rc3h1Q4VGL6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rc3h1Q4VGL6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rc3h1Q4VGL6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rc3h1Q4VGL6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rc3h1Q4VGL6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rc3h1Q4VGL6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.58■■□□□ 1.05
Rc3h1Q4VGL6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rc3h1Q4VGL6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rc3h1Q4VGL6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h1Q4VGL6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h1Q4VGL6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.57■■□□□ 1.04
Rc3h1Q4VGL6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h1Q4VGL6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h1Q4VGL6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h1Q4VGL6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Rc3h1Q4VGL6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.57■■□□□ 1.04
Rc3h1Q4VGL6 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.57■■□□□ 1.04
Rc3h1Q4VGL6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h1Q4VGL6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h1Q4VGL6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Rc3h1Q4VGL6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h1Q4VGL6 Gm22240-201ENSMUST00000175225 82 ntBASIC21.56■■□□□ 1.04
Rc3h1Q4VGL6 Gm44549-201ENSMUST00000208351 577 ntBASIC21.56■■□□□ 1.04
Rc3h1Q4VGL6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.56■■□□□ 1.04
Rc3h1Q4VGL6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h1Q4VGL6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.56■■□□□ 1.04
Rc3h1Q4VGL6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Rc3h1Q4VGL6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms