Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smad5P97454 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.72■□□□□ 0.43
Smad5P97454 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.72■□□□□ 0.43
Smad5P97454 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.72■□□□□ 0.43
Smad5P97454 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smad5P97454 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smad5P97454 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smad5P97454 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Smad5P97454 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smad5P97454 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smad5P97454 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smad5P97454 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smad5P97454 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smad5P97454 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smad5P97454 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.71■□□□□ 0.43
Smad5P97454 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smad5P97454 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Smad5P97454 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smad5P97454 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smad5P97454 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smad5P97454 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Smad5P97454 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Smad5P97454 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smad5P97454 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Smad5P97454 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smad5P97454 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smad5P97454 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smad5P97454 Gm13146-201ENSMUST00000118508 780 ntBASIC17.7■□□□□ 0.42
Smad5P97454 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Smad5P97454 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smad5P97454 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smad5P97454 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smad5P97454 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smad5P97454 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smad5P97454 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smad5P97454 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smad5P97454 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smad5P97454 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Smad5P97454 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smad5P97454 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.69■□□□□ 0.42
Smad5P97454 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smad5P97454 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smad5P97454 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smad5P97454 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smad5P97454 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smad5P97454 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smad5P97454 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smad5P97454 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smad5P97454 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smad5P97454 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smad5P97454 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smad5P97454 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smad5P97454 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smad5P97454 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.68■□□□□ 0.42
Smad5P97454 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smad5P97454 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smad5P97454 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smad5P97454 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smad5P97454 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smad5P97454 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.68■□□□□ 0.42
Smad5P97454 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smad5P97454 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smad5P97454 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Smad5P97454 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smad5P97454 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smad5P97454 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smad5P97454 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smad5P97454 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Smad5P97454 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smad5P97454 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smad5P97454 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smad5P97454 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.67■□□□□ 0.42
Smad5P97454 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.67■□□□□ 0.42
Smad5P97454 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Smad5P97454 Gm4968-201ENSMUST00000071458 858 ntBASIC17.67■□□□□ 0.42
Smad5P97454 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.67■□□□□ 0.42
Smad5P97454 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smad5P97454 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Smad5P97454 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smad5P97454 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smad5P97454 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Smad5P97454 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smad5P97454 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Smad5P97454 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Smad5P97454 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.67■□□□□ 0.42
Smad5P97454 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.66■□□□□ 0.42
Smad5P97454 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Smad5P97454 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smad5P97454 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smad5P97454 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smad5P97454 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smad5P97454 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.66■□□□□ 0.42
Smad5P97454 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.66■□□□□ 0.42
Smad5P97454 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smad5P97454 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smad5P97454 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Smad5P97454 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smad5P97454 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smad5P97454 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smad5P97454 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms