Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cdh6P97326 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh6P97326 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh6P97326 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.92■□□□□ 0.62
Cdh6P97326 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh6P97326 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cdh6P97326 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh6P97326 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh6P97326 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh6P97326 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.92■□□□□ 0.62
Cdh6P97326 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh6P97326 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.92■□□□□ 0.62
Cdh6P97326 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.92■□□□□ 0.62
Cdh6P97326 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh6P97326 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.92■□□□□ 0.62
Cdh6P97326 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh6P97326 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Cdh6P97326 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cdh6P97326 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh6P97326 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cdh6P97326 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh6P97326 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh6P97326 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh6P97326 Nespas-201ENSMUST00000143738 1083 ntBASIC18.91■□□□□ 0.62
Cdh6P97326 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.91■□□□□ 0.62
Cdh6P97326 Gm27405-201ENSMUST00000184201 112 ntBASIC18.91■□□□□ 0.62
Cdh6P97326 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.91■□□□□ 0.62
Cdh6P97326 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.91■□□□□ 0.62
Cdh6P97326 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh6P97326 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.91■□□□□ 0.62
Cdh6P97326 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cdh6P97326 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cdh6P97326 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh6P97326 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh6P97326 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh6P97326 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh6P97326 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh6P97326 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh6P97326 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh6P97326 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh6P97326 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh6P97326 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh6P97326 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh6P97326 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdh6P97326 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh6P97326 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.89■□□□□ 0.61
Cdh6P97326 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Cdh6P97326 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdh6P97326 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh6P97326 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh6P97326 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cdh6P97326 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh6P97326 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Cdh6P97326 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh6P97326 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cdh6P97326 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh6P97326 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh6P97326 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh6P97326 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh6P97326 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.89■□□□□ 0.61
Cdh6P97326 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.89■□□□□ 0.61
Cdh6P97326 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh6P97326 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdh6P97326 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh6P97326 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh6P97326 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh6P97326 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.88■□□□□ 0.61
Cdh6P97326 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh6P97326 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh6P97326 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.88■□□□□ 0.61
Cdh6P97326 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh6P97326 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh6P97326 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cdh6P97326 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.87■□□□□ 0.61
Cdh6P97326 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.87■□□□□ 0.61
Cdh6P97326 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cdh6P97326 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh6P97326 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh6P97326 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh6P97326 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh6P97326 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh6P97326 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdh6P97326 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdh6P97326 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdh6P97326 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdh6P97326 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh6P97326 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdh6P97326 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.86■□□□□ 0.61
Cdh6P97326 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdh6P97326 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 253.5 ms