Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.433e-9■■■□□ 17.1
LSM11P83369 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.06■□□□□ 0.323e-9■■■□□ 17.1
LSM11P83369 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.46□□□□□ -0.093e-9■■■□□ 17.1
LSM11P83369 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.54□□□□□ -0.243e-9■■■□□ 17.1
LSM11P83369 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.253e-9■■■□□ 17.1
LSM11P83369 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.51□□□□□ -0.413e-9■■■□□ 17.1
LSM11P83369 TMEM91-207ENST00000535712 400 ntTSL 212.07□□□□□ -0.483e-9■■■□□ 17.1
LSM11P83369 TMEM91-212ENST00000546050 378 ntTSL 312.07□□□□□ -0.483e-9■■■□□ 17.1
LSM11P83369 TMEM91-206ENST00000447302 721 ntTSL 2 BASIC11.3□□□□□ -0.63e-9■■■□□ 17.1
LSM11P83369 AC011462.1-201ENST00000604424 567 ntTSL 410.55□□□□□ -0.723e-9■■■□□ 17.1
LSM11P83369 TMEM91-204ENST00000413014 650 ntTSL 2 BASIC10.09□□□□□ -0.793e-9■■■□□ 17.1
LSM11P83369 TMEM91-214ENST00000604123 757 ntTSL 3 BASIC9.96□□□□□ -0.823e-9■■■□□ 17.1
LSM11P83369 TMEM91-201ENST00000342187 454 ntTSL 59□□□□□ -0.973e-9■■■□□ 17.1
LSM11P83369 TMEM91-213ENST00000546362 489 ntTSL 38.8□□□□□ -13e-9■■■□□ 17.1
LSM11P83369 YWHAZ-217ENST00000521328 511 ntTSL 58.96□□□□□ -0.982e-7■■■□□ 17.1
LSM11P83369 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.281e-6■■■□□ 17.1
LSM11P83369 CBFA2T3-203ENST00000562719 539 ntTSL 59.94□□□□□ -0.824e-6■■■□□ 17.1
LSM11P83369 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.423e-6■■■□□ 17.1
LSM11P83369 ANKRD11-206ENST00000562275 2762 ntTSL 513.23□□□□□ -0.294e-6■■■□□ 17.1
LSM11P83369 ANKRD11-209ENST00000564553 471 ntTSL 312.18□□□□□ -0.464e-6■■■□□ 17.1
LSM11P83369 ANKRD11-202ENST00000330736 8342 ntTSL 512.18□□□□□ -0.464e-6■■■□□ 17.1
LSM11P83369 CPSF1-209ENST00000532725 597 ntTSL 217.5■□□□□ 0.398e-7■■■□□ 17
LSM11P83369 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.61□□□□□ -0.078e-7■■■□□ 17
LSM11P83369 CPSF1-206ENST00000531480 789 ntTSL 312.84□□□□□ -0.358e-7■■■□□ 17
LSM11P83369 CPSF1-201ENST00000526271 697 ntTSL 312.46□□□□□ -0.418e-7■■■□□ 17
LSM11P83369 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.57■■□□□ 1.367e-10■■■□□ 17
LSM11P83369 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.35■□□□□ 0.057e-10■■■□□ 17
LSM11P83369 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.17e-10■■■□□ 17
LSM11P83369 AHSA2-205ENST00000471542 1971 ntTSL 213.71□□□□□ -0.227e-10■■■□□ 17
LSM11P83369 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.134e-8■■■□□ 17
LSM11P83369 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.433e-6■■■□□ 17
LSM11P83369 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.07□□□□□ -0.483e-6■■■□□ 17
LSM11P83369 SCARNA2-201ENST00000458748 420 ntBASIC15.14■□□□□ 0.011e-323■■■□□ 17
LSM11P83369 AL356488.2-201ENST00000602755 427 ntBASIC15.06■□□□□ 01e-323■■■□□ 17
LSM11P83369 FASN-207ENST00000635197 627 ntTSL 313.84□□□□□ -0.192e-7■■■□□ 17
LSM11P83369 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.452e-7■■■□□ 17
LSM11P83369 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.472e-7■■■□□ 17
LSM11P83369 NAT9-225ENST00000583834 1993 ntTSL 316.91■□□□□ 0.31e-9■■■□□ 17
LSM11P83369 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.22■□□□□ 0.191e-9■■■□□ 17
LSM11P83369 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.45■□□□□ 0.061e-9■■■□□ 17
LSM11P83369 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.31e-9■■■□□ 17
LSM11P83369 AC074091.1-201ENST00000505973 1741 ntTSL 2 BASIC10.55□□□□□ -0.725e-8■■■□□ 17
LSM11P83369 ZNF512-204ENST00000416005 3515 ntTSL 2 BASIC9.22□□□□□ -0.935e-8■■■□□ 17
LSM11P83369 ZNF512-202ENST00000379717 3417 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.15e-8■■■□□ 17
LSM11P83369 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC8.07□□□□□ -1.125e-8■■■□□ 17
LSM11P83369 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC8.04□□□□□ -1.125e-8■■■□□ 17
LSM11P83369 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC7.94□□□□□ -1.145e-8■■■□□ 17
LSM11P83369 ZNF512-206ENST00000488055 2465 ntTSL 26.25□□□□□ -1.415e-8■■■□□ 17
LSM11P83369 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC11.35□□□□□ -0.591e-30■■■□□ 17
LSM11P83369 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.921e-30■■■□□ 17
LSM11P83369 WSB1-204ENST00000467843 4187 ntTSL 1 (best)8.2□□□□□ -1.11e-30■■■□□ 17
LSM11P83369 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.51■□□□□ 0.711e-8■■■□□ 16.9
LSM11P83369 HES6-207ENST00000417803 474 ntTSL 319.4■□□□□ 0.71e-8■■■□□ 16.9
LSM11P83369 PGGHG-206ENST00000476372 2879 ntTSL 215.04■□□□□ -08e-7■■■□□ 16.9
LSM11P83369 PGGHG-205ENST00000474221 4418 ntTSL 213.01□□□□□ -0.338e-7■■■□□ 16.9
LSM11P83369 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.66□□□□□ -0.388e-7■■■□□ 16.9
LSM11P83369 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.488e-7■■■□□ 16.9
LSM11P83369 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.383e-7■■■□□ 16.9
LSM11P83369 FKBP2-206ENST00000541388 705 ntTSL 516.52■□□□□ 0.243e-7■■■□□ 16.9
LSM11P83369 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.153e-7■■■□□ 16.9
LSM11P83369 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.473e-7■■■□□ 16.9
LSM11P83369 DPP7-204ENST00000470766 478 ntTSL 211.9□□□□□ -0.59e-8■■■□□ 16.9
LSM11P83369 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.352e-6■■■□□ 16.9
LSM11P83369 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)15.99■□□□□ 0.152e-6■■■□□ 16.9
LSM11P83369 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)14.63□□□□□ -0.072e-6■■■□□ 16.9
LSM11P83369 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.24e-8■■■□□ 16.9
LSM11P83369 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.881e-7■■■□□ 16.9
LSM11P83369 YWHAZ-221ENST00000523131 567 ntTSL 518.16■□□□□ 0.51e-7■■■□□ 16.9
LSM11P83369 YWHAZ-208ENST00000418997 996 ntTSL 217.86■□□□□ 0.451e-7■■■□□ 16.9
LSM11P83369 YWHAZ-223ENST00000523938 626 ntTSL 517.44■□□□□ 0.381e-7■■■□□ 16.9
LSM11P83369 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.351e-7■■■□□ 16.9
LSM11P83369 YWHAZ-210ENST00000437293 701 ntTSL 316.7■□□□□ 0.261e-7■■■□□ 16.9
LSM11P83369 YWHAZ-215ENST00000518736 883 ntTSL 315.83■□□□□ 0.121e-7■■■□□ 16.9
LSM11P83369 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.031e-7■■■□□ 16.9
LSM11P83369 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.541e-7■■■□□ 16.9
LSM11P83369 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC11.16□□□□□ -0.621e-7■■■□□ 16.9
LSM11P83369 YWHAZ-207ENST00000395958 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.711e-7■■■□□ 16.9
LSM11P83369 YWHAZ-212ENST00000480304 2247 ntTSL 210.17□□□□□ -0.781e-7■■■□□ 16.9
LSM11P83369 YWHAZ-202ENST00000395948 812 ntTSL 3 BASIC8.59□□□□□ -1.031e-7■■■□□ 16.9
LSM11P83369 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.391e-7■■■□□ 16.9
LSM11P83369 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.451e-7■■■□□ 16.9
LSM11P83369 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.194e-11■■■□□ 16.9
LSM11P83369 RABL6-210ENST00000484471 2746 ntTSL 518.82■□□□□ 0.64e-11■■■□□ 16.9
LSM11P83369 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.334e-11■■■□□ 16.9
LSM11P83369 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.254e-11■■■□□ 16.9
LSM11P83369 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.62■■□□□ 1.052e-8■■■□□ 16.9
LSM11P83369 ALDH16A1-204ENST00000593417 2343 ntTSL 221.18■□□□□ 0.982e-8■■■□□ 16.9
LSM11P83369 SEPT5-203ENST00000406172 1996 ntTSL 521.05■□□□□ 0.965e-6■■■□□ 16.9
LSM11P83369 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.955e-6■■■□□ 16.9
LSM11P83369 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.14■□□□□ 0.822e-8■■■□□ 16.9
LSM11P83369 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.665e-6■■■□□ 16.9
LSM11P83369 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.445e-6■■■□□ 16.9
LSM11P83369 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.392e-7■■■□□ 16.9
LSM11P83369 ALDH16A1-205ENST00000594549 681 ntTSL 217.41■□□□□ 0.382e-8■■■□□ 16.9
LSM11P83369 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.252e-8■■■□□ 16.9
LSM11P83369 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.235e-6■■■□□ 16.9
LSM11P83369 UBE2I-208ENST00000473256 1771 ntTSL 216.28■□□□□ 0.25e-6■■■□□ 16.9
LSM11P83369 UBE2I-218ENST00000568288 501 ntTSL 515.72■□□□□ 0.115e-6■■■□□ 16.9
LSM11P83369 UBE2I-217ENST00000568209 266 ntTSL 515.62■□□□□ 0.095e-6■■■□□ 16.9
LSM11P83369 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.16■□□□□ 0.025e-6■■■□□ 16.9
Retrieved 100 of 11,495 protein–RNA pairs in 71 ms