Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcbP82349 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.65■□□□□ 0.26
SgcbP82349 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcbP82349 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcbP82349 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcbP82349 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SgcbP82349 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcbP82349 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcbP82349 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SgcbP82349 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SgcbP82349 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SgcbP82349 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SgcbP82349 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SgcbP82349 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcbP82349 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SgcbP82349 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcbP82349 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcbP82349 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SgcbP82349 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.64■□□□□ 0.25
SgcbP82349 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SgcbP82349 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcbP82349 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SgcbP82349 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcbP82349 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcbP82349 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.64■□□□□ 0.25
SgcbP82349 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcbP82349 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcbP82349 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcbP82349 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
SgcbP82349 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcbP82349 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcbP82349 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcbP82349 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SgcbP82349 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.63■□□□□ 0.25
SgcbP82349 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcbP82349 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcbP82349 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.63■□□□□ 0.25
SgcbP82349 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SgcbP82349 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcbP82349 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcbP82349 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
SgcbP82349 Gm10602-201ENSMUST00000098239 609 ntBASIC16.63■□□□□ 0.25
SgcbP82349 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SgcbP82349 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SgcbP82349 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SgcbP82349 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SgcbP82349 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcbP82349 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SgcbP82349 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcbP82349 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SgcbP82349 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SgcbP82349 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcbP82349 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SgcbP82349 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SgcbP82349 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcbP82349 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SgcbP82349 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcbP82349 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcbP82349 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcbP82349 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcbP82349 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
SgcbP82349 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.61■□□□□ 0.25
SgcbP82349 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.61■□□□□ 0.25
SgcbP82349 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcbP82349 Gm6365-201ENSMUST00000054711 744 ntBASIC16.61■□□□□ 0.25
SgcbP82349 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.61■□□□□ 0.25
SgcbP82349 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcbP82349 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SgcbP82349 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcbP82349 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcbP82349 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcbP82349 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcbP82349 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SgcbP82349 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SgcbP82349 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SgcbP82349 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.6■□□□□ 0.25
SgcbP82349 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcbP82349 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.6■□□□□ 0.25
SgcbP82349 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.6■□□□□ 0.25
SgcbP82349 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcbP82349 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcbP82349 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcbP82349 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SgcbP82349 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SgcbP82349 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcbP82349 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcbP82349 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SgcbP82349 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcbP82349 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcbP82349 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SgcbP82349 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcbP82349 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SgcbP82349 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcbP82349 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SgcbP82349 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SgcbP82349 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SgcbP82349 Mir5133-201ENSMUST00000174955 77 ntBASIC16.59■□□□□ 0.25
SgcbP82349 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.59■□□□□ 0.25
SgcbP82349 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SgcbP82349 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms