Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Gm26571-201ENSMUST00000181399 666 ntBASIC15.75■□□□□ 0.11
Lhx4P53776 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx4P53776 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx4P53776 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.75■□□□□ 0.11
Lhx4P53776 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx4P53776 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx4P53776 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx4P53776 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Lhx4P53776 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx4P53776 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx4P53776 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Lhx4P53776 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx4P53776 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Lhx4P53776 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lhx4P53776 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Lhx4P53776 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lhx4P53776 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lhx4P53776 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Lhx4P53776 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lhx4P53776 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Lhx4P53776 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lhx4P53776 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Lhx4P53776 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.74■□□□□ 0.11
Lhx4P53776 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Lhx4P53776 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Lhx4P53776 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Lhx4P53776 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lhx4P53776 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Lhx4P53776 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lhx4P53776 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.73■□□□□ 0.11
Lhx4P53776 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lhx4P53776 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.73■□□□□ 0.11
Lhx4P53776 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lhx4P53776 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lhx4P53776 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lhx4P53776 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lhx4P53776 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lhx4P53776 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Lhx4P53776 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lhx4P53776 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lhx4P53776 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lhx4P53776 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Lhx4P53776 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Lhx4P53776 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lhx4P53776 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lhx4P53776 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lhx4P53776 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Lhx4P53776 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lhx4P53776 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.72■□□□□ 0.11
Lhx4P53776 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lhx4P53776 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.72■□□□□ 0.11
Lhx4P53776 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
Lhx4P53776 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Lhx4P53776 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lhx4P53776 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.71■□□□□ 0.1
Lhx4P53776 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.7■□□□□ 0.1
Lhx4P53776 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.7■□□□□ 0.1
Lhx4P53776 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx4P53776 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Lhx4P53776 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx4P53776 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx4P53776 Reep4-203ENSMUST00000226563 1444 ntBASIC15.69■□□□□ 0.1
Lhx4P53776 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx4P53776 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx4P53776 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx4P53776 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Lhx4P53776 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.69■□□□□ 0.1
Lhx4P53776 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx4P53776 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.69■□□□□ 0.1
Lhx4P53776 Gm7291-201ENSMUST00000199147 382 ntBASIC15.69■□□□□ 0.1
Lhx4P53776 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.69■□□□□ 0.1
Lhx4P53776 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms