Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LIMK2P53671 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.36■■□□□ 1.01
LIMK2P53671 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LIMK2P53671 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.36■■□□□ 1.01
LIMK2P53671 AC012414.1-201ENST00000556676 535 ntBASIC21.36■■□□□ 1.01
LIMK2P53671 AL354811.1-201ENST00000610286 706 ntBASIC21.36■■□□□ 1.01
LIMK2P53671 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.36■■□□□ 1.01
LIMK2P53671 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LIMK2P53671 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LIMK2P53671 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.36■■□□□ 1.01
LIMK2P53671 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
LIMK2P53671 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LIMK2P53671 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
LIMK2P53671 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LIMK2P53671 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.35■■□□□ 1.01
LIMK2P53671 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
LIMK2P53671 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LIMK2P53671 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LIMK2P53671 AL024507.2-201ENST00000606070 2574 ntBASIC21.35■■□□□ 1.01
LIMK2P53671 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LIMK2P53671 AC123595.1-201ENST00000440769 1046 ntBASIC21.35■■□□□ 1.01
LIMK2P53671 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.35■■□□□ 1.01
LIMK2P53671 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.35■■□□□ 1.01
LIMK2P53671 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.35■■□□□ 1.01
LIMK2P53671 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.35■■□□□ 1.01
LIMK2P53671 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LIMK2P53671 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LIMK2P53671 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.34■■□□□ 1.01
LIMK2P53671 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.34■■□□□ 1.01
LIMK2P53671 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.34■■□□□ 1.01
LIMK2P53671 AF106564.1-201ENST00000607058 2553 ntBASIC21.34■■□□□ 1.01
LIMK2P53671 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LIMK2P53671 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.34■■□□□ 1.01
LIMK2P53671 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.34■■□□□ 1.01
LIMK2P53671 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LIMK2P53671 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LIMK2P53671 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
LIMK2P53671 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
LIMK2P53671 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LIMK2P53671 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.34■■□□□ 1.01
LIMK2P53671 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LIMK2P53671 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.33■■□□□ 1.01
LIMK2P53671 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LIMK2P53671 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.33■■□□□ 1.01
LIMK2P53671 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LIMK2P53671 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.33■■□□□ 1.01
LIMK2P53671 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
LIMK2P53671 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.33■■□□□ 1.01
LIMK2P53671 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LIMK2P53671 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.33■■□□□ 1.01
LIMK2P53671 AP005435.1-201ENST00000529293 1178 ntBASIC21.33■■□□□ 1.01
LIMK2P53671 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LIMK2P53671 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LIMK2P53671 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LIMK2P53671 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LIMK2P53671 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LIMK2P53671 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LIMK2P53671 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
LIMK2P53671 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LIMK2P53671 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LIMK2P53671 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
LIMK2P53671 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.32■■□□□ 1
LIMK2P53671 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.32■■□□□ 1
LIMK2P53671 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.32■■□□□ 1
LIMK2P53671 MIR6084-201ENST00000622012 110 ntBASIC21.32■■□□□ 1
LIMK2P53671 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
LIMK2P53671 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.32■■□□□ 1
LIMK2P53671 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.32■■□□□ 1
LIMK2P53671 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LIMK2P53671 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LIMK2P53671 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LIMK2P53671 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
LIMK2P53671 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LIMK2P53671 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.31■■□□□ 1
LIMK2P53671 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.31■■□□□ 1
LIMK2P53671 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.31■■□□□ 1
LIMK2P53671 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.31■■□□□ 1
LIMK2P53671 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.31■■□□□ 1
LIMK2P53671 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.31■■□□□ 1
LIMK2P53671 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.31■■□□□ 1
LIMK2P53671 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.31■■□□□ 1
LIMK2P53671 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LIMK2P53671 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.31■■□□□ 1
LIMK2P53671 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LIMK2P53671 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
LIMK2P53671 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LIMK2P53671 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.31■■□□□ 1
LIMK2P53671 PKD1P6-201ENST00000343738 4769 ntBASIC21.31■■□□□ 1
LIMK2P53671 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIMK2P53671 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIMK2P53671 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LIMK2P53671 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
LIMK2P53671 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIMK2P53671 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.3■■□□□ 1
LIMK2P53671 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.3■■□□□ 1
LIMK2P53671 KRT18P5-201ENST00000436075 1291 ntBASIC21.3■■□□□ 1
LIMK2P53671 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIMK2P53671 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.3■■□□□ 1
LIMK2P53671 DUX4L2-201ENST00000561772 1275 ntBASIC21.3■■□□□ 1
LIMK2P53671 AL034346.1-201ENST00000568244 1277 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms