Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Xcl1P47993 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC12.27□□□□□ -0.45
Xcl1P47993 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Xcl1P47993 Gm18688-201ENSMUST00000204695 1859 ntBASIC12.27□□□□□ -0.45
Xcl1P47993 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Xcl1P47993 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Xcl1P47993 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Xcl1P47993 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.26□□□□□ -0.45
Xcl1P47993 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.26□□□□□ -0.45
Xcl1P47993 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Xcl1P47993 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Xcl1P47993 AC166356.1-201ENSMUST00000228236 1426 ntBASIC12.26□□□□□ -0.45
Xcl1P47993 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Xcl1P47993 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Xcl1P47993 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Xcl1P47993 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Xcl1P47993 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Xcl1P47993 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Xcl1P47993 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Xcl1P47993 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Xcl1P47993 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Xcl1P47993 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Xcl1P47993 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.25□□□□□ -0.45
Xcl1P47993 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Xcl1P47993 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Xcl1P47993 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.25□□□□□ -0.45
Xcl1P47993 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC12.25□□□□□ -0.45
Xcl1P47993 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Xcl1P47993 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Xcl1P47993 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Xcl1P47993 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC12.25□□□□□ -0.45
Xcl1P47993 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Xcl1P47993 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Xcl1P47993 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Xcl1P47993 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Xcl1P47993 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Xcl1P47993 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Xcl1P47993 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC12.24□□□□□ -0.45
Xcl1P47993 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Xcl1P47993 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Xcl1P47993 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Xcl1P47993 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Xcl1P47993 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Xcl1P47993 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Xcl1P47993 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC12.23□□□□□ -0.45
Xcl1P47993 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 Gm12818-201ENSMUST00000117562 1349 ntBASIC12.23□□□□□ -0.45
Xcl1P47993 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 AC117769.4-201ENSMUST00000225679 685 ntBASIC12.23□□□□□ -0.45
Xcl1P47993 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Xcl1P47993 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Xcl1P47993 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.23□□□□□ -0.45
Xcl1P47993 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Xcl1P47993 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Xcl1P47993 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Xcl1P47993 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Xcl1P47993 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Xcl1P47993 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Xcl1P47993 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC12.22□□□□□ -0.45
Xcl1P47993 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Xcl1P47993 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms