Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh4P39038 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh4P39038 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh4P39038 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh4P39038 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh4P39038 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.83■□□□□ 0.44
Cdh4P39038 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Cdh4P39038 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.83■□□□□ 0.44
Cdh4P39038 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh4P39038 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh4P39038 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh4P39038 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Cdh4P39038 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh4P39038 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh4P39038 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh4P39038 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdh4P39038 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cdh4P39038 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh4P39038 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdh4P39038 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh4P39038 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.82■□□□□ 0.44
Cdh4P39038 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh4P39038 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh4P39038 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Cdh4P39038 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh4P39038 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh4P39038 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh4P39038 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh4P39038 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh4P39038 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdh4P39038 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh4P39038 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh4P39038 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh4P39038 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh4P39038 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh4P39038 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.81■□□□□ 0.44
Cdh4P39038 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh4P39038 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cdh4P39038 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh4P39038 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh4P39038 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh4P39038 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh4P39038 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdh4P39038 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.81■□□□□ 0.44
Cdh4P39038 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Cdh4P39038 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh4P39038 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh4P39038 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.81■□□□□ 0.44
Cdh4P39038 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh4P39038 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh4P39038 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh4P39038 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cdh4P39038 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh4P39038 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh4P39038 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cdh4P39038 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh4P39038 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh4P39038 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cdh4P39038 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh4P39038 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh4P39038 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Cdh4P39038 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cdh4P39038 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh4P39038 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh4P39038 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.79■□□□□ 0.44
Cdh4P39038 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh4P39038 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh4P39038 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cdh4P39038 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh4P39038 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh4P39038 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh4P39038 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh4P39038 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.78■□□□□ 0.44
Cdh4P39038 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh4P39038 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.78■□□□□ 0.44
Cdh4P39038 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.78■□□□□ 0.44
Cdh4P39038 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh4P39038 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh4P39038 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh4P39038 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh4P39038 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh4P39038 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh4P39038 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh4P39038 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.78■□□□□ 0.44
Cdh4P39038 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh4P39038 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh4P39038 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh4P39038 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh4P39038 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh4P39038 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh4P39038 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh4P39038 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cdh4P39038 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.77■□□□□ 0.44
Cdh4P39038 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.77■□□□□ 0.44
Cdh4P39038 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh4P39038 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh4P39038 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.77■□□□□ 0.44
Cdh4P39038 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh4P39038 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh4P39038 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms