Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1bP25119 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf1bP25119 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.27■□□□□ 0.36
Tnfrsf1bP25119 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.27■□□□□ 0.36
Tnfrsf1bP25119 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf1bP25119 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf1bP25119 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf1bP25119 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf1bP25119 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf1bP25119 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf1bP25119 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.27■□□□□ 0.36
Tnfrsf1bP25119 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.27■□□□□ 0.36
Tnfrsf1bP25119 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf1bP25119 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf1bP25119 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Tnfrsf1bP25119 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfrsf1bP25119 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfrsf1bP25119 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfrsf1bP25119 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf1bP25119 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.26■□□□□ 0.35
Tnfrsf1bP25119 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.26■□□□□ 0.35
Tnfrsf1bP25119 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf1bP25119 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf1bP25119 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1bP25119 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf1bP25119 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.24■□□□□ 0.35
Tnfrsf1bP25119 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf1bP25119 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tnfrsf1bP25119 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf1bP25119 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Tnfrsf1bP25119 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf1bP25119 Gm6365-201ENSMUST00000054711 744 ntBASIC17.24■□□□□ 0.35
Tnfrsf1bP25119 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tnfrsf1bP25119 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Tnfrsf1bP25119 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tnfrsf1bP25119 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf1bP25119 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf1bP25119 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1bP25119 Iqck-206ENSMUST00000208658 2891 ntBASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
Tnfrsf1bP25119 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms