Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Clk1P22518 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Clk1P22518 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Clk1P22518 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clk1P22518 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Clk1P22518 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clk1P22518 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clk1P22518 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clk1P22518 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clk1P22518 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clk1P22518 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
Clk1P22518 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clk1P22518 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clk1P22518 Gm7860-201ENSMUST00000121190 879 ntBASIC17.25■□□□□ 0.35
Clk1P22518 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.25■□□□□ 0.35
Clk1P22518 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.25■□□□□ 0.35
Clk1P22518 Gm10493-201ENSMUST00000097270 612 ntBASIC17.25■□□□□ 0.35
Clk1P22518 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Clk1P22518 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.25■□□□□ 0.35
Clk1P22518 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Clk1P22518 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clk1P22518 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clk1P22518 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clk1P22518 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clk1P22518 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.25■□□□□ 0.35
Clk1P22518 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Clk1P22518 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Clk1P22518 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk1P22518 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk1P22518 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.24■□□□□ 0.35
Clk1P22518 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk1P22518 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk1P22518 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.24■□□□□ 0.35
Clk1P22518 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clk1P22518 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk1P22518 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.24■□□□□ 0.35
Clk1P22518 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clk1P22518 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.23■□□□□ 0.35
Clk1P22518 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk1P22518 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk1P22518 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk1P22518 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Clk1P22518 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk1P22518 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.23■□□□□ 0.35
Clk1P22518 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.23■□□□□ 0.35
Clk1P22518 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk1P22518 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.23■□□□□ 0.35
Clk1P22518 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Clk1P22518 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk1P22518 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clk1P22518 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.23■□□□□ 0.35
Clk1P22518 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Clk1P22518 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk1P22518 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk1P22518 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.22■□□□□ 0.35
Clk1P22518 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clk1P22518 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk1P22518 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk1P22518 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.22■□□□□ 0.35
Clk1P22518 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clk1P22518 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.22■□□□□ 0.35
Clk1P22518 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk1P22518 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk1P22518 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk1P22518 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk1P22518 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.35
Clk1P22518 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clk1P22518 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk1P22518 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk1P22518 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk1P22518 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk1P22518 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk1P22518 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk1P22518 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk1P22518 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clk1P22518 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.21■□□□□ 0.35
Clk1P22518 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk1P22518 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.21■□□□□ 0.35
Clk1P22518 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk1P22518 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Clk1P22518 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Clk1P22518 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms