Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Cd48P18181 Smad6-203ENSMUST00000179458 273 ntBASIC16.73■□□□□ 0.27
Cd48P18181 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd48P18181 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.73■□□□□ 0.27
Cd48P18181 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd48P18181 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cd48P18181 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd48P18181 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd48P18181 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Cd48P18181 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd48P18181 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cd48P18181 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd48P18181 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cd48P18181 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cd48P18181 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd48P18181 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cd48P18181 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cd48P18181 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd48P18181 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd48P18181 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd48P18181 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.72■□□□□ 0.27
Cd48P18181 Gm12251-201ENSMUST00000117893 792 ntBASIC16.72■□□□□ 0.27
Cd48P18181 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Cd48P18181 Gm8493-201ENSMUST00000196881 489 ntBASIC16.72■□□□□ 0.27
Cd48P18181 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.72■□□□□ 0.27
Cd48P18181 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cd48P18181 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd48P18181 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd48P18181 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cd48P18181 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd48P18181 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cd48P18181 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cd48P18181 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd48P18181 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd48P18181 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.72■□□□□ 0.27
Cd48P18181 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.71■□□□□ 0.27
Cd48P18181 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cd48P18181 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.71■□□□□ 0.27
Cd48P18181 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd48P18181 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd48P18181 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd48P18181 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.71■□□□□ 0.27
Cd48P18181 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cd48P18181 Gm21956-201ENSMUST00000179946 522 ntBASIC16.71■□□□□ 0.27
Cd48P18181 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.71■□□□□ 0.27
Cd48P18181 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.71■□□□□ 0.27
Cd48P18181 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.71■□□□□ 0.27
Cd48P18181 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd48P18181 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Cd48P18181 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd48P18181 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd48P18181 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cd48P18181 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.71■□□□□ 0.27
Cd48P18181 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cd48P18181 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd48P18181 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cd48P18181 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd48P18181 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Cd48P18181 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Cd48P18181 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd48P18181 Gm27801-201ENSMUST00000184174 223 ntBASIC16.7■□□□□ 0.26
Cd48P18181 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cd48P18181 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cd48P18181 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cd48P18181 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd48P18181 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd48P18181 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd48P18181 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd48P18181 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cd48P18181 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cd48P18181 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd48P18181 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd48P18181 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd48P18181 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd48P18181 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd48P18181 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd48P18181 BC021767-201ENSMUST00000126387 1716 ntBASIC16.69■□□□□ 0.26
Cd48P18181 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd48P18181 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cd48P18181 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cd48P18181 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cd48P18181 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd48P18181 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.68■□□□□ 0.26
Cd48P18181 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd48P18181 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd48P18181 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Cd48P18181 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.68■□□□□ 0.26
Cd48P18181 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd48P18181 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cd48P18181 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.68■□□□□ 0.26
Cd48P18181 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd48P18181 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Cd48P18181 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd48P18181 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd48P18181 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd48P18181 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd48P18181 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd48P18181 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd48P18181 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd48P18181 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms