Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdx1P18111 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdx1P18111 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdx1P18111 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdx1P18111 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdx1P18111 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdx1P18111 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdx1P18111 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cdx1P18111 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.97□□□□□ -0.01
Cdx1P18111 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cdx1P18111 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.97□□□□□ -0.01
Cdx1P18111 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdx1P18111 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdx1P18111 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cdx1P18111 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Cdx1P18111 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Cdx1P18111 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cdx1P18111 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.96□□□□□ -0.02
Cdx1P18111 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cdx1P18111 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Cdx1P18111 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cdx1P18111 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.95□□□□□ -0.02
Cdx1P18111 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Cdx1P18111 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cdx1P18111 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cdx1P18111 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cdx1P18111 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cdx1P18111 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdx1P18111 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cdx1P18111 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.94□□□□□ -0.02
Cdx1P18111 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Cdx1P18111 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.94□□□□□ -0.02
Cdx1P18111 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.94□□□□□ -0.02
Cdx1P18111 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.94□□□□□ -0.02
Cdx1P18111 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.94□□□□□ -0.02
Cdx1P18111 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.94□□□□□ -0.02
Cdx1P18111 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx1P18111 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
Cdx1P18111 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx1P18111 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx1P18111 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.93□□□□□ -0.02
Cdx1P18111 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms