Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc8P09025 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.09■□□□□ 0.81
Hoxc8P09025 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc8P09025 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Hoxc8P09025 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Hoxc8P09025 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc8P09025 Golph3-202ENSMUST00000226517 2359 ntBASIC20.09■□□□□ 0.81
Hoxc8P09025 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc8P09025 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc8P09025 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc8P09025 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.08■□□□□ 0.81
Hoxc8P09025 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc8P09025 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Hoxc8P09025 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.08■□□□□ 0.81
Hoxc8P09025 Gm37055-201ENSMUST00000191866 133 ntBASIC20.08■□□□□ 0.81
Hoxc8P09025 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.08■□□□□ 0.81
Hoxc8P09025 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.08■□□□□ 0.81
Hoxc8P09025 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc8P09025 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxc8P09025 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxc8P09025 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxc8P09025 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxc8P09025 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Hoxc8P09025 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.07■□□□□ 0.8
Hoxc8P09025 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc8P09025 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc8P09025 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc8P09025 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.07■□□□□ 0.8
Hoxc8P09025 Zfp783-201ENSMUST00000095946 670 ntBASIC20.07■□□□□ 0.8
Hoxc8P09025 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc8P09025 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc8P09025 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.07■□□□□ 0.8
Hoxc8P09025 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc8P09025 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc8P09025 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Hoxc8P09025 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Hoxc8P09025 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.06■□□□□ 0.8
Hoxc8P09025 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.06■□□□□ 0.8
Hoxc8P09025 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc8P09025 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.06■□□□□ 0.8
Hoxc8P09025 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc8P09025 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc8P09025 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc8P09025 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc8P09025 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc8P09025 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc8P09025 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Hoxc8P09025 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Hoxc8P09025 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc8P09025 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc8P09025 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.05■□□□□ 0.8
Hoxc8P09025 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc8P09025 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.05■□□□□ 0.8
Hoxc8P09025 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.05■□□□□ 0.8
Hoxc8P09025 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc8P09025 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc8P09025 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc8P09025 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc8P09025 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc8P09025 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc8P09025 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc8P09025 Gm15565-201ENSMUST00000118890 427 ntBASIC20.04■□□□□ 0.8
Hoxc8P09025 Gm13836-201ENSMUST00000121159 501 ntBASIC20.04■□□□□ 0.8
Hoxc8P09025 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.04■□□□□ 0.8
Hoxc8P09025 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.04■□□□□ 0.8
Hoxc8P09025 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc8P09025 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc8P09025 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.03■□□□□ 0.8
Hoxc8P09025 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc8P09025 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc8P09025 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hoxc8P09025 Mir5122-201ENSMUST00000175004 89 ntBASIC20.03■□□□□ 0.8
Hoxc8P09025 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hoxc8P09025 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.03■□□□□ 0.8
Hoxc8P09025 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc8P09025 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc8P09025 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc8P09025 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hoxc8P09025 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Hoxc8P09025 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc8P09025 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.02■□□□□ 0.8
Hoxc8P09025 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Hoxc8P09025 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc8P09025 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.02■□□□□ 0.8
Hoxc8P09025 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Hoxc8P09025 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc8P09025 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc8P09025 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc8P09025 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxc8P09025 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Hoxc8P09025 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hoxc8P09025 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hoxc8P09025 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
Hoxc8P09025 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Hoxc8P09025 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc8P09025 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc8P09025 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc8P09025 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxc8P09025 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Hoxc8P09025 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms