Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 MIR6821-201ENST00000617625 74 ntBASIC21.13■□□□□ 0.97
PRAMEF1O95521 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF1O95521 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
PRAMEF1O95521 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.13■□□□□ 0.97
PRAMEF1O95521 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF1O95521 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF1O95521 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF1O95521 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF1O95521 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF1O95521 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF1O95521 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF1O95521 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF1O95521 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF1O95521 AC244015.2-201ENST00000616358 1861 ntBASIC21.12■□□□□ 0.97
PRAMEF1O95521 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.12■□□□□ 0.97
PRAMEF1O95521 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.12■□□□□ 0.97
PRAMEF1O95521 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF1O95521 RARRES2P6-201ENST00000567333 442 ntBASIC21.12■□□□□ 0.97
PRAMEF1O95521 KRT87P-202ENST00000534226 1464 ntBASIC21.12■□□□□ 0.97
PRAMEF1O95521 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.12■□□□□ 0.97
PRAMEF1O95521 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.12■□□□□ 0.97
PRAMEF1O95521 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF1O95521 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF1O95521 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.11■□□□□ 0.97
PRAMEF1O95521 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF1O95521 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.11■□□□□ 0.97
PRAMEF1O95521 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF1O95521 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF1O95521 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF1O95521 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF1O95521 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.1■□□□□ 0.97
PRAMEF1O95521 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF1O95521 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF1O95521 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.1■□□□□ 0.97
PRAMEF1O95521 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF1O95521 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF1O95521 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.1■□□□□ 0.97
PRAMEF1O95521 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF1O95521 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
PRAMEF1O95521 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF1O95521 AC087623.3-201ENST00000607047 1098 ntBASIC21.1■□□□□ 0.97
PRAMEF1O95521 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PRAMEF1O95521 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PRAMEF1O95521 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF1O95521 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.1■□□□□ 0.97
PRAMEF1O95521 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAMEF1O95521 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.09■□□□□ 0.97
PRAMEF1O95521 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF1O95521 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF1O95521 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PRAMEF1O95521 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF1O95521 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF1O95521 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF1O95521 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PRAMEF1O95521 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.09■□□□□ 0.97
PRAMEF1O95521 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.09■□□□□ 0.97
PRAMEF1O95521 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.09■□□□□ 0.97
PRAMEF1O95521 AC026271.2-201ENST00000428091 497 ntBASIC21.09■□□□□ 0.97
PRAMEF1O95521 DUX4L2-201ENST00000561772 1275 ntBASIC21.09■□□□□ 0.97
PRAMEF1O95521 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
PRAMEF1O95521 DUX4L6-201ENST00000626483 1275 ntBASIC21.09■□□□□ 0.97
PRAMEF1O95521 DUX4L1-201ENST00000627662 1275 ntBASIC21.09■□□□□ 0.97
PRAMEF1O95521 DUX4L8-201ENST00000629013 1275 ntBASIC21.09■□□□□ 0.97
PRAMEF1O95521 DUX4L3-201ENST00000630187 1275 ntBASIC21.09■□□□□ 0.97
PRAMEF1O95521 DUX4L7-201ENST00000630678 1275 ntBASIC21.09■□□□□ 0.97
PRAMEF1O95521 DUX4L5-201ENST00000630834 1275 ntBASIC21.09■□□□□ 0.97
PRAMEF1O95521 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.09■□□□□ 0.97
PRAMEF1O95521 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF1O95521 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF1O95521 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF1O95521 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF1O95521 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAMEF1O95521 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF1O95521 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF1O95521 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.08■□□□□ 0.97
PRAMEF1O95521 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF1O95521 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF1O95521 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF1O95521 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF1O95521 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PRAMEF1O95521 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.08■□□□□ 0.97
PRAMEF1O95521 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF1O95521 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAMEF1O95521 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRAMEF1O95521 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PRAMEF1O95521 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PRAMEF1O95521 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PRAMEF1O95521 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF1O95521 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF1O95521 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF1O95521 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.07■□□□□ 0.96
PRAMEF1O95521 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF1O95521 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.07■□□□□ 0.96
PRAMEF1O95521 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.07■□□□□ 0.96
PRAMEF1O95521 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.07■□□□□ 0.96
PRAMEF1O95521 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PRAMEF1O95521 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF1O95521 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRAMEF1O95521 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.07■□□□□ 0.96
PRAMEF1O95521 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms