Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vti1bO88384 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Vti1bO88384 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vti1bO88384 Rarb-207ENSMUST00000225921 2756 ntBASIC17.77■□□□□ 0.43
Vti1bO88384 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Vti1bO88384 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1bO88384 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1bO88384 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1bO88384 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Vti1bO88384 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1bO88384 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Vti1bO88384 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.76■□□□□ 0.43
Vti1bO88384 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1bO88384 Gm26833-201ENSMUST00000180899 440 ntBASIC17.76■□□□□ 0.43
Vti1bO88384 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1bO88384 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1bO88384 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1bO88384 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1bO88384 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1bO88384 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vti1bO88384 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Vti1bO88384 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vti1bO88384 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Vti1bO88384 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vti1bO88384 Gm11421-201ENSMUST00000122124 294 ntBASIC17.75■□□□□ 0.43
Vti1bO88384 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vti1bO88384 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vti1bO88384 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vti1bO88384 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.75■□□□□ 0.43
Vti1bO88384 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.75■□□□□ 0.43
Vti1bO88384 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vti1bO88384 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.75■□□□□ 0.43
Vti1bO88384 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Vti1bO88384 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vti1bO88384 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Vti1bO88384 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1bO88384 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1bO88384 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.74■□□□□ 0.43
Vti1bO88384 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1bO88384 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1bO88384 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.74■□□□□ 0.43
Vti1bO88384 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1bO88384 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1bO88384 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.74■□□□□ 0.43
Vti1bO88384 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Vti1bO88384 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1bO88384 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Vti1bO88384 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1bO88384 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1bO88384 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1bO88384 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Vti1bO88384 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1bO88384 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1bO88384 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Vti1bO88384 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.73■□□□□ 0.43
Vti1bO88384 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.73■□□□□ 0.43
Vti1bO88384 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.73■□□□□ 0.43
Vti1bO88384 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1bO88384 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vti1bO88384 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1bO88384 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1bO88384 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.73■□□□□ 0.43
Vti1bO88384 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.73■□□□□ 0.43
Vti1bO88384 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vti1bO88384 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1bO88384 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.72■□□□□ 0.43
Vti1bO88384 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1bO88384 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1bO88384 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1bO88384 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vti1bO88384 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Vti1bO88384 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.72■□□□□ 0.43
Vti1bO88384 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Vti1bO88384 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1bO88384 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1bO88384 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1bO88384 Grk6-206ENSMUST00000224995 2971 ntBASIC17.72■□□□□ 0.43
Vti1bO88384 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1bO88384 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1bO88384 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vti1bO88384 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.71■□□□□ 0.43
Vti1bO88384 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1bO88384 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1bO88384 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.71■□□□□ 0.43
Vti1bO88384 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1bO88384 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.71■□□□□ 0.43
Vti1bO88384 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vti1bO88384 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Vti1bO88384 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Vti1bO88384 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.71■□□□□ 0.43
Vti1bO88384 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vti1bO88384 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vti1bO88384 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1bO88384 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1bO88384 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1bO88384 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Vti1bO88384 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1bO88384 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1bO88384 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vti1bO88384 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms