Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh12O55134 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdh12O55134 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh12O55134 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh12O55134 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh12O55134 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh12O55134 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdh12O55134 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.9■□□□□ 0.3
Pcdh12O55134 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.9■□□□□ 0.3
Pcdh12O55134 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdh12O55134 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh12O55134 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.3
Pcdh12O55134 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdh12O55134 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdh12O55134 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh12O55134 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.89■□□□□ 0.29
Pcdh12O55134 Gm27405-201ENSMUST00000184201 112 ntBASIC16.89■□□□□ 0.29
Pcdh12O55134 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh12O55134 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.89■□□□□ 0.29
Pcdh12O55134 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh12O55134 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh12O55134 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh12O55134 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.89■□□□□ 0.29
Pcdh12O55134 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh12O55134 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh12O55134 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh12O55134 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh12O55134 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh12O55134 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh12O55134 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.88■□□□□ 0.29
Pcdh12O55134 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh12O55134 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Pcdh12O55134 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh12O55134 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh12O55134 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh12O55134 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh12O55134 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh12O55134 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdh12O55134 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh12O55134 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh12O55134 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh12O55134 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.88■□□□□ 0.29
Pcdh12O55134 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdh12O55134 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.87■□□□□ 0.29
Pcdh12O55134 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdh12O55134 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh12O55134 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh12O55134 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh12O55134 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh12O55134 Gm7291-201ENSMUST00000199147 382 ntBASIC16.87■□□□□ 0.29
Pcdh12O55134 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdh12O55134 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh12O55134 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
Pcdh12O55134 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdh12O55134 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh12O55134 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdh12O55134 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh12O55134 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh12O55134 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdh12O55134 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
Pcdh12O55134 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdh12O55134 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdh12O55134 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.86■□□□□ 0.29
Pcdh12O55134 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdh12O55134 Gm38205-201ENSMUST00000192243 258 ntBASIC16.86■□□□□ 0.29
Pcdh12O55134 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdh12O55134 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Pcdh12O55134 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh12O55134 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh12O55134 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh12O55134 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh12O55134 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms